Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 LINC01960-201ENST00000563759 1884 ntBASIC17.52■□□□□ 0.4
UBA52P62987 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.52■□□□□ 0.4
UBA52P62987 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
UBA52P62987 AP005212.1-201ENST00000581547 1997 ntBASIC17.52■□□□□ 0.4
UBA52P62987 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.52■□□□□ 0.4
UBA52P62987 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.52■□□□□ 0.4
UBA52P62987 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.52■□□□□ 0.4
UBA52P62987 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.52■□□□□ 0.4
UBA52P62987 AC087239.1-201ENST00000622671 572 ntBASIC17.52■□□□□ 0.4
UBA52P62987 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
UBA52P62987 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA52P62987 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
UBA52P62987 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBA52P62987 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBA52P62987 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
UBA52P62987 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.51■□□□□ 0.39
UBA52P62987 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.51■□□□□ 0.39
UBA52P62987 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UBA52P62987 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBA52P62987 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBA52P62987 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBA52P62987 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.5■□□□□ 0.39
UBA52P62987 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBA52P62987 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.5■□□□□ 0.39
UBA52P62987 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.5■□□□□ 0.39
UBA52P62987 SMG8-203ENST00000578922 2178 ntBASIC17.5■□□□□ 0.39
UBA52P62987 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.5■□□□□ 0.39
UBA52P62987 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBA52P62987 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 AC004687.1-201ENST00000579003 1625 ntBASIC17.5■□□□□ 0.39
UBA52P62987 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBA52P62987 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.49■□□□□ 0.39
UBA52P62987 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UBA52P62987 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBA52P62987 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA52P62987 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBA52P62987 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.49■□□□□ 0.39
UBA52P62987 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.49■□□□□ 0.39
UBA52P62987 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBA52P62987 AL355802.2-201ENST00000402069 882 ntBASIC17.49■□□□□ 0.39
UBA52P62987 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA52P62987 CROCCP5-201ENST00000436658 830 ntBASIC17.49■□□□□ 0.39
UBA52P62987 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.49■□□□□ 0.39
UBA52P62987 AC010141.3-201ENST00000456659 717 ntBASIC17.49■□□□□ 0.39
UBA52P62987 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.49■□□□□ 0.39
UBA52P62987 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.49■□□□□ 0.39
UBA52P62987 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.49■□□□□ 0.39
UBA52P62987 AL109923.1-201ENST00000618799 583 ntBASIC17.49■□□□□ 0.39
UBA52P62987 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBA52P62987 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBA52P62987 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
UBA52P62987 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBA52P62987 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBA52P62987 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms