Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.41□□□□□ -0.1
RPL39P62891 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.4□□□□□ -0.1
RPL39P62891 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.4□□□□□ -0.1
RPL39P62891 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.4□□□□□ -0.1
RPL39P62891 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RPL39P62891 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RPL39P62891 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.4□□□□□ -0.1
RPL39P62891 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.4□□□□□ -0.1
RPL39P62891 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPL39P62891 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPL39P62891 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPL39P62891 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.4□□□□□ -0.1
RPL39P62891 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.4□□□□□ -0.1
RPL39P62891 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.4□□□□□ -0.1
RPL39P62891 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPL39P62891 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.4□□□□□ -0.1
RPL39P62891 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RPL39P62891 AL138724.1-201ENST00000606771 1088 ntBASIC14.4□□□□□ -0.1
RPL39P62891 AC136469.2-201ENST00000623944 1028 ntBASIC14.4□□□□□ -0.1
RPL39P62891 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPL39P62891 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPL39P62891 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RPL39P62891 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RPL39P62891 AC125437.2-201ENST00000625180 2167 ntBASIC14.4□□□□□ -0.1
RPL39P62891 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPL39P62891 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPL39P62891 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.4□□□□□ -0.1
RPL39P62891 AC120498.9-201ENST00000339021 3867 ntBASIC14.4□□□□□ -0.11
RPL39P62891 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.39□□□□□ -0.11
RPL39P62891 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.39□□□□□ -0.11
RPL39P62891 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.39□□□□□ -0.11
RPL39P62891 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.39□□□□□ -0.11
RPL39P62891 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RPL39P62891 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RPL39P62891 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RPL39P62891 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.39□□□□□ -0.11
RPL39P62891 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.39□□□□□ -0.11
RPL39P62891 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RPL39P62891 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.39□□□□□ -0.11
RPL39P62891 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL39P62891 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.39□□□□□ -0.11
RPL39P62891 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RPL39P62891 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RPL39P62891 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
RPL39P62891 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RPL39P62891 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.38□□□□□ -0.11
RPL39P62891 AL512631.2-201ENST00000604634 923 ntBASIC14.38□□□□□ -0.11
RPL39P62891 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 AP000974.1-201ENST00000623909 2387 ntBASIC14.38□□□□□ -0.11
RPL39P62891 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RPL39P62891 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RPL39P62891 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPL39P62891 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.37□□□□□ -0.11
RPL39P62891 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.37□□□□□ -0.11
RPL39P62891 AC055733.4-201ENST00000638462 1354 ntBASIC14.37□□□□□ -0.11
RPL39P62891 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.37□□□□□ -0.11
RPL39P62891 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.37□□□□□ -0.11
RPL39P62891 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.37□□□□□ -0.11
RPL39P62891 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.37□□□□□ -0.11
RPL39P62891 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPL39P62891 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms