Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S1P61966 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
AP1S1P61966 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.59■□□□□ 0.89
AP1S1P61966 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.59■□□□□ 0.89
AP1S1P61966 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.59■□□□□ 0.89
AP1S1P61966 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 AC007225.1-201ENST00000566331 1836 ntBASIC20.59■□□□□ 0.89
AP1S1P61966 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S1P61966 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.59■□□□□ 0.89
AP1S1P61966 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.59■□□□□ 0.89
AP1S1P61966 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S1P61966 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.58■□□□□ 0.89
AP1S1P61966 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.58■□□□□ 0.89
AP1S1P61966 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
AP1S1P61966 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S1P61966 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S1P61966 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
AP1S1P61966 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.58■□□□□ 0.89
AP1S1P61966 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.58■□□□□ 0.89
AP1S1P61966 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.58■□□□□ 0.88
AP1S1P61966 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S1P61966 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S1P61966 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S1P61966 FP700111.2-201ENST00000619190 1892 ntBASIC20.58■□□□□ 0.88
AP1S1P61966 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S1P61966 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
AP1S1P61966 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S1P61966 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
AP1S1P61966 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S1P61966 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S1P61966 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S1P61966 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S1P61966 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.57■□□□□ 0.88
AP1S1P61966 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.57■□□□□ 0.88
AP1S1P61966 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.57■□□□□ 0.88
AP1S1P61966 DUSP5P2-201ENST00000426873 1033 ntBASIC20.57■□□□□ 0.88
AP1S1P61966 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.57■□□□□ 0.88
AP1S1P61966 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.57■□□□□ 0.88
AP1S1P61966 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.57■□□□□ 0.88
AP1S1P61966 AC098934.4-201ENST00000564127 592 ntBASIC20.57■□□□□ 0.88
AP1S1P61966 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S1P61966 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S1P61966 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S1P61966 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S1P61966 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
AP1S1P61966 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.56■□□□□ 0.88
AP1S1P61966 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.56■□□□□ 0.88
AP1S1P61966 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.56■□□□□ 0.88
AP1S1P61966 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.56■□□□□ 0.88
AP1S1P61966 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 AC091874.3-201ENST00000512672 1195 ntBASIC20.56■□□□□ 0.88
AP1S1P61966 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
AP1S1P61966 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
AP1S1P61966 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S1P61966 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.56■□□□□ 0.88
AP1S1P61966 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
AP1S1P61966 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
AP1S1P61966 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.55■□□□□ 0.88
AP1S1P61966 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S1P61966 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S1P61966 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S1P61966 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
AP1S1P61966 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.55■□□□□ 0.88
AP1S1P61966 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.55■□□□□ 0.88
AP1S1P61966 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.55■□□□□ 0.88
AP1S1P61966 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.55■□□□□ 0.88
AP1S1P61966 MYC-209ENST00000641252 345 ntBASIC20.55■□□□□ 0.88
AP1S1P61966 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S1P61966 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S1P61966 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S1P61966 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S1P61966 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.54■□□□□ 0.88
AP1S1P61966 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.54■□□□□ 0.88
AP1S1P61966 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.54■□□□□ 0.88
AP1S1P61966 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.54■□□□□ 0.88
AP1S1P61966 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.54■□□□□ 0.88
AP1S1P61966 AC097658.1-201ENST00000475555 843 ntBASIC20.54■□□□□ 0.88
AP1S1P61966 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.54■□□□□ 0.88
AP1S1P61966 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S1P61966 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms