Protein–RNA interactions for Protein: P61587

RND3, Rho-related GTP-binding protein RhoE, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RND3P61587 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.8■□□□□ 0.28
RND3P61587 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.8■□□□□ 0.28
RND3P61587 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RND3P61587 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RND3P61587 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RND3P61587 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RND3P61587 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RND3P61587 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RND3P61587 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RND3P61587 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.8■□□□□ 0.28
RND3P61587 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 RARRES2P11-201ENST00000635158 484 ntBASIC16.79■□□□□ 0.28
RND3P61587 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.79■□□□□ 0.28
RND3P61587 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RND3P61587 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
RND3P61587 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
RND3P61587 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 TSPY26P-201ENST00000476365 1326 ntBASIC16.78■□□□□ 0.28
RND3P61587 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RND3P61587 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.78■□□□□ 0.28
RND3P61587 AC024257.2-201ENST00000549699 147 ntBASIC16.78■□□□□ 0.28
RND3P61587 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.78■□□□□ 0.28
RND3P61587 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RND3P61587 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RND3P61587 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RND3P61587 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.77■□□□□ 0.28
RND3P61587 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
RND3P61587 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 AC245052.3-201ENST00000450182 901 ntBASIC16.77■□□□□ 0.28
RND3P61587 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.77■□□□□ 0.28
RND3P61587 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RND3P61587 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RND3P61587 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.77■□□□□ 0.27
RND3P61587 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RND3P61587 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RND3P61587 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RND3P61587 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
RND3P61587 AC018445.3-201ENST00000624177 1945 ntBASIC16.76■□□□□ 0.27
RND3P61587 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RND3P61587 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.76■□□□□ 0.27
RND3P61587 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.76■□□□□ 0.27
RND3P61587 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RND3P61587 MIR572-201ENST00000384983 95 ntBASIC16.76■□□□□ 0.27
RND3P61587 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.76■□□□□ 0.27
RND3P61587 AL136116.3-201ENST00000402907 1138 ntBASIC16.76■□□□□ 0.27
RND3P61587 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.76■□□□□ 0.27
RND3P61587 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.76■□□□□ 0.27
RND3P61587 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RND3P61587 AL136162.1-201ENST00000607711 1078 ntBASIC16.76■□□□□ 0.27
RND3P61587 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.76■□□□□ 0.27
RND3P61587 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
RND3P61587 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RND3P61587 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.76■□□□□ 0.27
RND3P61587 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RND3P61587 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RND3P61587 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RND3P61587 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RND3P61587 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RND3P61587 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.75■□□□□ 0.27
RND3P61587 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RND3P61587 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RND3P61587 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.75■□□□□ 0.27
RND3P61587 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
RND3P61587 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms