Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC4P55056 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
APOC4P55056 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC4P55056 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.97□□□□□ -0.01
APOC4P55056 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC4P55056 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC4P55056 KRT18P29-201ENST00000397031 1267 ntBASIC14.97□□□□□ -0.01
APOC4P55056 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.97□□□□□ -0.01
APOC4P55056 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
APOC4P55056 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC4P55056 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.97□□□□□ -0.01
APOC4P55056 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.97□□□□□ -0.01
APOC4P55056 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC4P55056 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
APOC4P55056 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC4P55056 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
APOC4P55056 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
APOC4P55056 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.96□□□□□ -0.01
APOC4P55056 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
APOC4P55056 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.96□□□□□ -0.01
APOC4P55056 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.96□□□□□ -0.01
APOC4P55056 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.96□□□□□ -0.01
APOC4P55056 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
APOC4P55056 MIR4651-201ENST00000582622 73 ntBASIC14.96□□□□□ -0.01
APOC4P55056 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC4P55056 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
APOC4P55056 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOC4P55056 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
APOC4P55056 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.96□□□□□ -0.02
APOC4P55056 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOC4P55056 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.95□□□□□ -0.02
APOC4P55056 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC4P55056 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 AC092368.3-202ENST00000574180 1591 ntBASIC14.95□□□□□ -0.02
APOC4P55056 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC4P55056 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
APOC4P55056 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
APOC4P55056 ESRRAP1-201ENST00000400596 1257 ntBASIC14.95□□□□□ -0.02
APOC4P55056 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC4P55056 C2orf69P4-201ENST00000565394 541 ntBASIC14.95□□□□□ -0.02
APOC4P55056 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
APOC4P55056 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.95□□□□□ -0.02
APOC4P55056 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC4P55056 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
APOC4P55056 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
APOC4P55056 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
APOC4P55056 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.94□□□□□ -0.02
APOC4P55056 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.94□□□□□ -0.02
APOC4P55056 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 AL049796.1-201ENST00000565336 1766 ntBASIC14.94□□□□□ -0.02
APOC4P55056 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
APOC4P55056 ITM2C-210ENST00000620962 501 ntBASIC14.94□□□□□ -0.02
APOC4P55056 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC4P55056 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOC4P55056 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC4P55056 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.93□□□□□ -0.02
APOC4P55056 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOC4P55056 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC4P55056 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms