Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PSMD4P55036 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.97■□□□□ 0.63
PSMD4P55036 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PSMD4P55036 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.96■□□□□ 0.63
PSMD4P55036 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PSMD4P55036 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.96■□□□□ 0.63
PSMD4P55036 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.96■□□□□ 0.63
PSMD4P55036 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PSMD4P55036 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 AC007225.1-201ENST00000566331 1836 ntBASIC18.96■□□□□ 0.63
PSMD4P55036 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.96■□□□□ 0.63
PSMD4P55036 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PSMD4P55036 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.96■□□□□ 0.63
PSMD4P55036 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.96■□□□□ 0.63
PSMD4P55036 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.96■□□□□ 0.63
PSMD4P55036 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 AC069236.1-201ENST00000604339 616 ntBASIC18.96■□□□□ 0.63
PSMD4P55036 AC080038.1-201ENST00000611274 1154 ntBASIC18.96■□□□□ 0.63
PSMD4P55036 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 AC092437.1-201ENST00000624794 1048 ntBASIC18.96■□□□□ 0.63
PSMD4P55036 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PSMD4P55036 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PSMD4P55036 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PSMD4P55036 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.96■□□□□ 0.63
PSMD4P55036 AIRN-201ENST00000601203 4374 ntBASIC18.96■□□□□ 0.63
PSMD4P55036 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PSMD4P55036 SLC25A24-204ENST00000569674 2357 ntBASIC18.96■□□□□ 0.63
PSMD4P55036 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.95■□□□□ 0.62
PSMD4P55036 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.95■□□□□ 0.62
PSMD4P55036 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PSMD4P55036 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PSMD4P55036 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 PGM5P4-201ENST00000421970 445 ntBASIC18.95■□□□□ 0.62
PSMD4P55036 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.95■□□□□ 0.62
PSMD4P55036 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.95■□□□□ 0.62
PSMD4P55036 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.95■□□□□ 0.62
PSMD4P55036 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.95■□□□□ 0.62
PSMD4P55036 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.95■□□□□ 0.62
PSMD4P55036 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PSMD4P55036 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PSMD4P55036 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSMD4P55036 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSMD4P55036 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PSMD4P55036 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSMD4P55036 AC027702.1-201ENST00000563810 1770 ntBASIC18.94■□□□□ 0.62
PSMD4P55036 CNN2P6-201ENST00000439038 900 ntBASIC18.94■□□□□ 0.62
PSMD4P55036 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.94■□□□□ 0.62
PSMD4P55036 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.94■□□□□ 0.62
PSMD4P55036 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PSMD4P55036 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSMD4P55036 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.94■□□□□ 0.62
PSMD4P55036 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.94■□□□□ 0.62
PSMD4P55036 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PSMD4P55036 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSMD4P55036 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PSMD4P55036 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSMD4P55036 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSMD4P55036 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PSMD4P55036 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSMD4P55036 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSMD4P55036 AC068338.2-201ENST00000563278 1430 ntBASIC18.93■□□□□ 0.62
PSMD4P55036 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.93■□□□□ 0.62
PSMD4P55036 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.93■□□□□ 0.62
PSMD4P55036 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.93■□□□□ 0.62
PSMD4P55036 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PSMD4P55036 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PSMD4P55036 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.93■□□□□ 0.62
PSMD4P55036 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSMD4P55036 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSMD4P55036 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PSMD4P55036 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSMD4P55036 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.93■□□□□ 0.62
PSMD4P55036 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PSMD4P55036 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.93■□□□□ 0.62
PSMD4P55036 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.93■□□□□ 0.62
PSMD4P55036 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms