Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.65■□□□□ 0.58
HMGA2P52926 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGA2P52926 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGA2P52926 AC079140.4-201ENST00000507448 529 ntBASIC18.65■□□□□ 0.58
HMGA2P52926 AF213884.3-201ENST00000563833 479 ntBASIC18.65■□□□□ 0.58
HMGA2P52926 AC120498.10-201ENST00000621827 505 ntBASIC18.65■□□□□ 0.58
HMGA2P52926 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGA2P52926 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGA2P52926 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HMGA2P52926 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGA2P52926 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGA2P52926 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGA2P52926 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HMGA2P52926 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HMGA2P52926 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.64■□□□□ 0.58
HMGA2P52926 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGA2P52926 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HMGA2P52926 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGA2P52926 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGA2P52926 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGA2P52926 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGA2P52926 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HMGA2P52926 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGA2P52926 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGA2P52926 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGA2P52926 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGA2P52926 AL031432.3-201ENST00000607698 485 ntBASIC18.64■□□□□ 0.57
HMGA2P52926 AL358852.1-201ENST00000623174 1268 ntBASIC18.64■□□□□ 0.57
HMGA2P52926 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGA2P52926 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HMGA2P52926 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGA2P52926 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGA2P52926 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HMGA2P52926 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HMGA2P52926 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HMGA2P52926 TMEM179-206ENST00000616017 1645 ntBASIC18.63■□□□□ 0.57
HMGA2P52926 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGA2P52926 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HMGA2P52926 AC010141.2-201ENST00000452426 721 ntBASIC18.63■□□□□ 0.57
HMGA2P52926 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGA2P52926 KRT8P36-201ENST00000489121 1440 ntBASIC18.63■□□□□ 0.57
HMGA2P52926 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGA2P52926 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HMGA2P52926 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGA2P52926 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGA2P52926 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGA2P52926 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGA2P52926 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGA2P52926 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGA2P52926 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGA2P52926 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGA2P52926 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGA2P52926 AL158211.5-201ENST00000623583 2518 ntBASIC18.62■□□□□ 0.57
HMGA2P52926 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGA2P52926 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HMGA2P52926 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGA2P52926 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.62■□□□□ 0.57
HMGA2P52926 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGA2P52926 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGA2P52926 AC018445.3-201ENST00000624177 1945 ntBASIC18.62■□□□□ 0.57
HMGA2P52926 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGA2P52926 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGA2P52926 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGA2P52926 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGA2P52926 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGA2P52926 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGA2P52926 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGA2P52926 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGA2P52926 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGA2P52926 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGA2P52926 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGA2P52926 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.61■□□□□ 0.57
HMGA2P52926 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGA2P52926 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
HMGA2P52926 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGA2P52926 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms