Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.03■□□□□ 0.8
CLCNKAP51800 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLCNKAP51800 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CLCNKAP51800 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLCNKAP51800 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.03■□□□□ 0.8
CLCNKAP51800 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCNKAP51800 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CLCNKAP51800 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CLCNKAP51800 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCNKAP51800 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCNKAP51800 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.02■□□□□ 0.8
CLCNKAP51800 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CLCNKAP51800 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLCNKAP51800 PLK5-205ENST00000642079 1969 ntBASIC20.02■□□□□ 0.8
CLCNKAP51800 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCNKAP51800 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCNKAP51800 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCNKAP51800 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCNKAP51800 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCNKAP51800 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCNKAP51800 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCNKAP51800 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCNKAP51800 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCNKAP51800 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.01■□□□□ 0.79
CLCNKAP51800 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCNKAP51800 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.01■□□□□ 0.79
CLCNKAP51800 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.01■□□□□ 0.79
CLCNKAP51800 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCNKAP51800 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCNKAP51800 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.01■□□□□ 0.79
CLCNKAP51800 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCNKAP51800 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCNKAP51800 AC027702.1-201ENST00000563810 1770 ntBASIC20■□□□□ 0.79
CLCNKAP51800 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CLCNKAP51800 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLCNKAP51800 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCNKAP51800 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCNKAP51800 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20■□□□□ 0.79
CLCNKAP51800 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CLCNKAP51800 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCNKAP51800 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCNKAP51800 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLCNKAP51800 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20■□□□□ 0.79
CLCNKAP51800 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCNKAP51800 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCNKAP51800 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20■□□□□ 0.79
CLCNKAP51800 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CLCNKAP51800 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCNKAP51800 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCNKAP51800 AL356652.1-201ENST00000615962 565 ntBASIC19.99■□□□□ 0.79
CLCNKAP51800 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCNKAP51800 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCNKAP51800 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCNKAP51800 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCNKAP51800 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CLCNKAP51800 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.98■□□□□ 0.79
CLCNKAP51800 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms