Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC9A3P48764 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC9A3P48764 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC9A3P48764 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
SLC9A3P48764 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC9A3P48764 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SLC9A3P48764 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.64■□□□□ 0.58
SLC9A3P48764 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC9A3P48764 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC9A3P48764 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC9A3P48764 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC9A3P48764 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC9A3P48764 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SLC9A3P48764 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC9A3P48764 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC9A3P48764 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC9A3P48764 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC9A3P48764 AC010141.2-201ENST00000452426 721 ntBASIC18.64■□□□□ 0.57
SLC9A3P48764 RARRES2P11-201ENST00000635158 484 ntBASIC18.64■□□□□ 0.57
SLC9A3P48764 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC9A3P48764 AC020907.5-201ENST00000624372 1936 ntBASIC18.64■□□□□ 0.57
SLC9A3P48764 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC9A3P48764 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC9A3P48764 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC9A3P48764 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC9A3P48764 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC9A3P48764 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC9A3P48764 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC9A3P48764 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC9A3P48764 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC9A3P48764 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC9A3P48764 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.63■□□□□ 0.57
SLC9A3P48764 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC9A3P48764 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.63■□□□□ 0.57
SLC9A3P48764 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC9A3P48764 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC9A3P48764 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC9A3P48764 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC9A3P48764 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC9A3P48764 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC9A3P48764 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 AC123595.1-201ENST00000440769 1046 ntBASIC18.62■□□□□ 0.57
SLC9A3P48764 DUX4L2-201ENST00000561772 1275 ntBASIC18.62■□□□□ 0.57
SLC9A3P48764 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC9A3P48764 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
SLC9A3P48764 DUX4L6-201ENST00000626483 1275 ntBASIC18.62■□□□□ 0.57
SLC9A3P48764 DUX4L1-201ENST00000627662 1275 ntBASIC18.62■□□□□ 0.57
SLC9A3P48764 DUX4L8-201ENST00000629013 1275 ntBASIC18.62■□□□□ 0.57
SLC9A3P48764 DUX4L3-201ENST00000630187 1275 ntBASIC18.62■□□□□ 0.57
SLC9A3P48764 DUX4L7-201ENST00000630678 1275 ntBASIC18.62■□□□□ 0.57
SLC9A3P48764 DUX4L5-201ENST00000630834 1275 ntBASIC18.62■□□□□ 0.57
SLC9A3P48764 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLC9A3P48764 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC9A3P48764 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC9A3P48764 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SLC9A3P48764 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC9A3P48764 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC9A3P48764 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC9A3P48764 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC9A3P48764 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC9A3P48764 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
SLC9A3P48764 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC9A3P48764 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC9A3P48764 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC9A3P48764 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC9A3P48764 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC9A3P48764 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.61■□□□□ 0.57
SLC9A3P48764 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC9A3P48764 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC9A3P48764 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC9A3P48764 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SLC9A3P48764 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC9A3P48764 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC9A3P48764 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC9A3P48764 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC9A3P48764 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC9A3P48764 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC9A3P48764 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC9A3P48764 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC9A3P48764 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC9A3P48764 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms