Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 YDR018CYDR018C 1191 nt0.68□□□□□ -2.3
TY1B-JR2P47100 MRP49YKL167C 414 nt0.68□□□□□ -2.3
TY1B-JR2P47100 APC5YOR249C 2058 nt0.68□□□□□ -2.3
TY1B-JR2P47100 CHC1YGL206C 4962 nt0.68□□□□□ -2.3
TY1B-JR2P47100 YDL026WYDL026W 312 nt0.68□□□□□ -2.3
TY1B-JR2P47100 CIC1YHR052W 1131 nt0.68□□□□□ -2.3
TY1B-JR2P47100 YBR032WYBR032W 303 nt0.68□□□□□ -2.3
TY1B-JR2P47100 RXT2YBR095C 1293 nt0.68□□□□□ -2.3
TY1B-JR2P47100 PPN1YDR452W 2025 nt0.67□□□□□ -2.3
TY1B-JR2P47100 YER189WYER189W 369 nt0.67□□□□□ -2.3
TY1B-JR2P47100 YLR307C-AYLR307C-A 264 nt0.67□□□□□ -2.3
TY1B-JR2P47100 TOA1YOR194C 861 nt0.67□□□□□ -2.3
TY1B-JR2P47100 YBR277CYBR277C 402 nt0.67□□□□□ -2.3
TY1B-JR2P47100 BIT61YJL058C 1632 nt0.67□□□□□ -2.3
TY1B-JR2P47100 YBL077WYBL077W 432 nt0.66□□□□□ -2.3
TY1B-JR2P47100 YPR145C-AYPR145C-A 237 nt0.66□□□□□ -2.3
TY1B-JR2P47100 ASI3YNL008C 2031 nt0.66□□□□□ -2.3
TY1B-JR2P47100 SEC63YOR254C 1992 nt0.65□□□□□ -2.3
TY1B-JR2P47100 YFR010W-AYFR010W-A 189 nt0.65□□□□□ -2.3
TY1B-JR2P47100 YBR201C-AYBR201C-A 204 nt0.65□□□□□ -2.3
TY1B-JR2P47100 AIM6YDL237W 1173 nt0.65□□□□□ -2.31
TY1B-JR2P47100 YEA4YEL004W 1029 nt0.65□□□□□ -2.31
TY1B-JR2P47100 NYV1YLR093C 762 nt0.65□□□□□ -2.31
TY1B-JR2P47100 YMR181CYMR181C 465 nt0.65□□□□□ -2.31
TY1B-JR2P47100 CLB5YPR120C 1308 nt0.64□□□□□ -2.31
TY1B-JR2P47100 DIG2YDR480W 972 nt0.64□□□□□ -2.31
TY1B-JR2P47100 YLR169WYLR169W 354 nt0.64□□□□□ -2.31
TY1B-JR2P47100 LTP1YPR073C 486 nt0.64□□□□□ -2.31
TY1B-JR2P47100 PES4YFR023W 1836 nt0.64□□□□□ -2.31
TY1B-JR2P47100 ATG10YLL042C 504 nt0.63□□□□□ -2.31
TY1B-JR2P47100 YOR161W-BYOR161W-B 261 nt0.63□□□□□ -2.31
TY1B-JR2P47100 snR14snR14 160 nt0.63□□□□□ -2.31
TY1B-JR2P47100 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
TY1B-JR2P47100 RLM1YPL089C 2031 nt0.62□□□□□ -2.31
TY1B-JR2P47100 SHU2YDR078C 672 nt0.61□□□□□ -2.31
TY1B-JR2P47100 YMR099CYMR099C 894 nt0.61□□□□□ -2.31
TY1B-JR2P47100 CTR9YOL145C 3234 nt0.61□□□□□ -2.31
TY1B-JR2P47100 YAP3YHL009C 993 nt0.6□□□□□ -2.31
TY1B-JR2P47100 SPC1YJR010C-A 285 nt0.6□□□□□ -2.31
TY1B-JR2P47100 LST4YKL176C 2487 nt0.6□□□□□ -2.31
TY1B-JR2P47100 YNL034WYNL034W 1839 nt0.6□□□□□ -2.31
TY1B-JR2P47100 NGL1YOL042W 1092 nt0.6□□□□□ -2.31
TY1B-JR2P47100 SAS3YBL052C 2496 nt0.59□□□□□ -2.31
TY1B-JR2P47100 MUB1YMR100W 1863 nt0.59□□□□□ -2.31
TY1B-JR2P47100 VPS55YJR044C 423 nt0.59□□□□□ -2.32
TY1B-JR2P47100 TEN1YLR010C 483 nt0.59□□□□□ -2.32
TY1B-JR2P47100 ATG38YLR211C 681 nt0.59□□□□□ -2.32
TY1B-JR2P47100 WHI3YNL197C 1986 nt0.59□□□□□ -2.32
TY1B-JR2P47100 YIL161WYIL161W 708 nt0.58□□□□□ -2.32
TY1B-JR2P47100 YOR152CYOR152C 771 nt0.58□□□□□ -2.32
TY1B-JR2P47100 PET123YOR158W 957 nt0.58□□□□□ -2.32
TY1B-JR2P47100 SRL4YPL033C 846 nt0.58□□□□□ -2.32
TY1B-JR2P47100 ARK1YNL020C 1917 nt0.58□□□□□ -2.32
TY1B-JR2P47100 SLK19YOR195W 2466 nt0.58□□□□□ -2.32
TY1B-JR2P47100 CUP9YPL177C 921 nt0.57□□□□□ -2.32
TY1B-JR2P47100 JJJ2YJL162C 1752 nt0.57□□□□□ -2.32
TY1B-JR2P47100 YIR023C-AYIR023C-A 324 nt0.57□□□□□ -2.32
TY1B-JR2P47100 GIM3YNL153C 390 nt0.57□□□□□ -2.32
TY1B-JR2P47100 YNR068CYNR068C 819 nt0.57□□□□□ -2.32
TY1B-JR2P47100 NOP53YPL146C 1368 nt0.57□□□□□ -2.32
TY1B-JR2P47100 ASM4YDL088C 1587 nt0.56□□□□□ -2.32
TY1B-JR2P47100 NSE4YDL105W 1209 nt0.56□□□□□ -2.32
TY1B-JR2P47100 PHO92YDR374C 921 nt0.56□□□□□ -2.32
TY1B-JR2P47100 COBQ0105 1158 nt0.56□□□□□ -2.32
TY1B-JR2P47100 BTN2YGR142W 1233 nt0.56□□□□□ -2.32
TY1B-JR2P47100 PRM6YML047C 1059 nt0.56□□□□□ -2.32
TY1B-JR2P47100 KAR9YPL269W 1935 nt0.56□□□□□ -2.32
TY1B-JR2P47100 YJL022WYJL022W 309 nt0.55□□□□□ -2.32
TY1B-JR2P47100 SNC2YOR327C 348 nt0.55□□□□□ -2.32
TY1B-JR2P47100 YPR063CYPR063C 423 nt0.55□□□□□ -2.32
TY1B-JR2P47100 CUR1YPR158W 759 nt0.55□□□□□ -2.32
TY1B-JR2P47100 YSW1YBR148W 1830 nt0.55□□□□□ -2.32
TY1B-JR2P47100 ECM11YDR446W 909 nt0.55□□□□□ -2.32
TY1B-JR2P47100 IES5YER092W 378 nt0.55□□□□□ -2.32
TY1B-JR2P47100 YHR214W-AYHR214W-A 486 nt0.55□□□□□ -2.32
TY1B-JR2P47100 SRP21YKL122C 504 nt0.55□□□□□ -2.32
TY1B-JR2P47100 YAR068WYAR068W 486 nt0.55□□□□□ -2.32
TY1B-JR2P47100 SEC8YPR055W 3198 nt0.54□□□□□ -2.32
TY1B-JR2P47100 NSE3YDR288W 912 nt0.54□□□□□ -2.32
TY1B-JR2P47100 MTC7YEL033W 420 nt0.54□□□□□ -2.32
TY1B-JR2P47100 BET5YML077W 480 nt0.54□□□□□ -2.32
TY1B-JR2P47100 NSL1YPL233W 651 nt0.54□□□□□ -2.32
TY1B-JR2P47100 YCL001W-AYCL001W-A 462 nt0.54□□□□□ -2.32
TY1B-JR2P47100 COG8YML071C 1824 nt0.54□□□□□ -2.32
TY1B-JR2P47100 CET1YPL228W 1650 nt0.54□□□□□ -2.32
TY1B-JR2P47100 MUM3YOR298W 1440 nt0.53□□□□□ -2.32
TY1B-JR2P47100 PRP39YML046W 1890 nt0.53□□□□□ -2.32
TY1B-JR2P47100 TAN1YGL232W 870 nt0.52□□□□□ -2.33
TY1B-JR2P47100 YHR022CYHR022C 771 nt0.52□□□□□ -2.33
TY1B-JR2P47100 YIR036W-AYIR036W-A 402 nt0.52□□□□□ -2.33
TY1B-JR2P47100 YLR290CYLR290C 834 nt0.52□□□□□ -2.33
TY1B-JR2P47100 CSI2YOL007C 1026 nt0.52□□□□□ -2.33
TY1B-JR2P47100 YCR108CYCR108C 192 nt0.52□□□□□ -2.33
TY1B-JR2P47100 DSE2YHR143W 978 nt0.52□□□□□ -2.33
TY1B-JR2P47100 ALG5YPL227C 1005 nt0.52□□□□□ -2.33
TY1B-JR2P47100 EPT1YHR123W 1176 nt0.51□□□□□ -2.33
TY1B-JR2P47100 snR191snR191 274 nt0.51□□□□□ -2.33
TY1B-JR2P47100 YGL177WYGL177W 348 nt0.5□□□□□ -2.33
TY1B-JR2P47100 RPL6BYLR448W 531 nt0.5□□□□□ -2.33
TY1B-JR2P47100 LTO1YNL260C 597 nt0.5□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms