Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 CUP9YPL177C 921 nt0.63□□□□□ -2.31
TY1B-JR1P47098 RXT2YBR095C 1293 nt0.63□□□□□ -2.31
TY1B-JR1P47098 CRM1YGR218W 3255 nt0.63□□□□□ -2.31
TY1B-JR1P47098 YDR132CYDR132C 1488 nt0.63□□□□□ -2.31
TY1B-JR1P47098 HLR1YDR528W 1272 nt0.62□□□□□ -2.31
TY1B-JR1P47098 YAP3YHL009C 993 nt0.62□□□□□ -2.31
TY1B-JR1P47098 CTL1YMR180C 963 nt0.62□□□□□ -2.31
TY1B-JR1P47098 YOR152CYOR152C 771 nt0.62□□□□□ -2.31
TY1B-JR1P47098 ACA1YER045C 1470 nt0.62□□□□□ -2.31
TY1B-JR1P47098 YNL034WYNL034W 1839 nt0.62□□□□□ -2.31
TY1B-JR1P47098 SEC63YOR254C 1992 nt0.62□□□□□ -2.31
TY1B-JR1P47098 CTR9YOL145C 3234 nt0.62□□□□□ -2.31
TY1B-JR1P47098 SAS3YBL052C 2496 nt0.61□□□□□ -2.31
TY1B-JR1P47098 YOR203WYOR203W 354 nt0.61□□□□□ -2.31
TY1B-JR1P47098 SLK19YOR195W 2466 nt0.61□□□□□ -2.31
TY1B-JR1P47098 RMD5YDR255C 1266 nt0.6□□□□□ -2.31
TY1B-JR1P47098 YGR190CYGR190C 366 nt0.6□□□□□ -2.31
TY1B-JR1P47098 TOA1YOR194C 861 nt0.6□□□□□ -2.31
TY1B-JR1P47098 YBR277CYBR277C 402 nt0.6□□□□□ -2.31
TY1B-JR1P47098 SEC8YPR055W 3198 nt0.6□□□□□ -2.31
TY1B-JR1P47098 CET1YPL228W 1650 nt0.6□□□□□ -2.31
TY1B-JR1P47098 COG8YML071C 1824 nt0.59□□□□□ -2.31
TY1B-JR1P47098 YDR320W-BYDR320W-B 138 nt0.59□□□□□ -2.32
TY1B-JR1P47098 LRS4YDR439W 1044 nt0.59□□□□□ -2.32
TY1B-JR1P47098 YGR064WYGR064W 369 nt0.59□□□□□ -2.32
TY1B-JR1P47098 MRP49YKL167C 414 nt0.59□□□□□ -2.32
TY1B-JR1P47098 YPR145C-AYPR145C-A 237 nt0.59□□□□□ -2.32
TY1B-JR1P47098 CUR1YPR158W 759 nt0.59□□□□□ -2.32
TY1B-JR1P47098 CLG1YGL215W 1359 nt0.59□□□□□ -2.32
TY1B-JR1P47098 IES5YER092W 378 nt0.58□□□□□ -2.32
TY1B-JR1P47098 YER189WYER189W 369 nt0.58□□□□□ -2.32
TY1B-JR1P47098 YOR161W-BYOR161W-B 261 nt0.58□□□□□ -2.32
TY1B-JR1P47098 NSL1YPL233W 651 nt0.58□□□□□ -2.32
TY1B-JR1P47098 LTP1YPR073C 486 nt0.58□□□□□ -2.32
TY1B-JR1P47098 PRP39YML046W 1890 nt0.58□□□□□ -2.32
TY1B-JR1P47098 DIG2YDR480W 972 nt0.57□□□□□ -2.32
TY1B-JR1P47098 APC5YOR249C 2058 nt0.57□□□□□ -2.32
TY1B-JR1P47098 KAR9YPL269W 1935 nt0.57□□□□□ -2.32
TY1B-JR1P47098 YEA4YEL004W 1029 nt0.57□□□□□ -2.32
TY1B-JR1P47098 BTN2YGR142W 1233 nt0.57□□□□□ -2.32
TY1B-JR1P47098 NYV1YLR093C 762 nt0.57□□□□□ -2.32
TY1B-JR1P47098 SLF1YDR515W 1344 nt0.57□□□□□ -2.32
TY1B-JR1P47098 PES4YFR023W 1836 nt0.56□□□□□ -2.32
TY1B-JR1P47098 SPC1YJR010C-A 285 nt0.56□□□□□ -2.32
TY1B-JR1P47098 ATG10YLL042C 504 nt0.56□□□□□ -2.32
TY1B-JR1P47098 YMR181CYMR181C 465 nt0.55□□□□□ -2.32
TY1B-JR1P47098 CLB5YPR120C 1308 nt0.55□□□□□ -2.32
TY1B-JR1P47098 BIT61YJL058C 1632 nt0.55□□□□□ -2.32
TY1B-JR1P47098 YDR338CYDR338C 2088 nt0.55□□□□□ -2.32
TY1B-JR1P47098 MRPL25YGR076C 474 nt0.55□□□□□ -2.32
TY1B-JR1P47098 VPS55YJR044C 423 nt0.55□□□□□ -2.32
TY1B-JR1P47098 SPC42YKL042W 1092 nt0.55□□□□□ -2.32
TY1B-JR1P47098 YBR201C-AYBR201C-A 204 nt0.55□□□□□ -2.32
TY1B-JR1P47098 YFR010W-AYFR010W-A 189 nt0.54□□□□□ -2.32
TY1B-JR1P47098 YIL161WYIL161W 708 nt0.54□□□□□ -2.32
TY1B-JR1P47098 YIR023C-AYIR023C-A 324 nt0.53□□□□□ -2.32
TY1B-JR1P47098 TEN1YLR010C 483 nt0.53□□□□□ -2.32
TY1B-JR1P47098 PET123YOR158W 957 nt0.53□□□□□ -2.32
TY1B-JR1P47098 SNC2YOR327C 348 nt0.53□□□□□ -2.32
TY1B-JR1P47098 CSE1YGL238W 2883 nt0.53□□□□□ -2.33
TY1B-JR1P47098 NSE4YDL105W 1209 nt0.52□□□□□ -2.33
TY1B-JR1P47098 YGL177WYGL177W 348 nt0.52□□□□□ -2.33
TY1B-JR1P47098 WHI3YNL197C 1986 nt0.52□□□□□ -2.33
TY1B-JR1P47098 ASM4YDL088C 1587 nt0.52□□□□□ -2.33
TY1B-JR1P47098 NSE3YDR288W 912 nt0.52□□□□□ -2.33
TY1B-JR1P47098 YHR214W-AYHR214W-A 486 nt0.52□□□□□ -2.33
TY1B-JR1P47098 ATG38YLR211C 681 nt0.52□□□□□ -2.33
TY1B-JR1P47098 YAR068WYAR068W 486 nt0.52□□□□□ -2.33
TY1B-JR1P47098 YPR063CYPR063C 423 nt0.52□□□□□ -2.33
TY1B-JR1P47098 MYO1YHR023W 5787 nt0.51□□□□□ -2.33
TY1B-JR1P47098 NOP53YPL146C 1368 nt0.51□□□□□ -2.33
TY1B-JR1P47098 CDC27YBL084C 2277 nt0.51□□□□□ -2.33
TY1B-JR1P47098 MTC7YEL033W 420 nt0.51□□□□□ -2.33
TY1B-JR1P47098 YER091C-AYER091C-A 222 nt0.51□□□□□ -2.33
TY1B-JR1P47098 YJL022WYJL022W 309 nt0.51□□□□□ -2.33
TY1B-JR1P47098 YNR068CYNR068C 819 nt0.51□□□□□ -2.33
TY1B-JR1P47098 SRL4YPL033C 846 nt0.51□□□□□ -2.33
TY1B-JR1P47098 YBR063CYBR063C 1215 nt0.51□□□□□ -2.33
TY1B-JR1P47098 GIM3YNL153C 390 nt0.5□□□□□ -2.33
TY1B-JR1P47098 NGL1YOL042W 1092 nt0.5□□□□□ -2.33
TY1B-JR1P47098 YMR099CYMR099C 894 nt0.5□□□□□ -2.33
TY1B-JR1P47098 YBL077WYBL077W 432 nt0.5□□□□□ -2.33
TY1B-JR1P47098 MUB1YMR100W 1863 nt0.49□□□□□ -2.33
TY1B-JR1P47098 YSW1YBR148W 1830 nt0.49□□□□□ -2.33
TY1B-JR1P47098 WAR1YML076C 2835 nt0.49□□□□□ -2.33
TY1B-JR1P47098 RIF2YLR453C 1188 nt0.49□□□□□ -2.33
TY1B-JR1P47098 YNL179CYNL179C 438 nt0.49□□□□□ -2.33
TY1B-JR1P47098 ARK1YNL020C 1917 nt0.49□□□□□ -2.33
TY1B-JR1P47098 RGI1YER067W 486 nt0.48□□□□□ -2.33
TY1B-JR1P47098 SRP21YKL122C 504 nt0.47□□□□□ -2.33
TY1B-JR1P47098 CSI2YOL007C 1026 nt0.47□□□□□ -2.33
TY1B-JR1P47098 YPR159C-AYPR159C-A 102 nt0.47□□□□□ -2.33
TY1B-JR1P47098 YML002WYML002W 2214 nt0.47□□□□□ -2.33
TY1B-JR1P47098 JJJ2YJL162C 1752 nt0.47□□□□□ -2.33
TY1B-JR1P47098 PRM6YML047C 1059 nt0.47□□□□□ -2.33
TY1B-JR1P47098 YCL001W-AYCL001W-A 462 nt0.47□□□□□ -2.33
TY1B-JR1P47098 MUK1YPL070W 1839 nt0.46□□□□□ -2.34
TY1B-JR1P47098 COBQ0105 1158 nt0.46□□□□□ -2.34
TY1B-JR1P47098 RPL40AYIL148W 387 nt0.46□□□□□ -2.34
TY1B-JR1P47098 SPP381YBR152W 876 nt0.46□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms