Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 RRP5YMR229C 5190 nt3.73□□□□□ -1.81
MSH4P40965 SNF12YNR023W 1701 nt3.73□□□□□ -1.81
MSH4P40965 TCP1YDR212W 1680 nt3.72□□□□□ -1.81
MSH4P40965 RPL26AYLR344W 384 nt3.72□□□□□ -1.81
MSH4P40965 YNL170WYNL170W 396 nt3.72□□□□□ -1.81
MSH4P40965 YNL338WYNL338W 159 nt3.72□□□□□ -1.81
MSH4P40965 YOR011W-AYOR011W-A 207 nt3.72□□□□□ -1.81
MSH4P40965 DIA2YOR080W 2199 nt3.72□□□□□ -1.81
MSH4P40965 REC8YPR007C 2043 nt3.71□□□□□ -1.81
MSH4P40965 YMR317WYMR317W 3423 nt3.71□□□□□ -1.82
MSH4P40965 PSF1YDR013W 627 nt3.71□□□□□ -1.82
MSH4P40965 ADK1YDR226W 669 nt3.71□□□□□ -1.82
MSH4P40965 YDR250CYDR250C 276 nt3.71□□□□□ -1.82
MSH4P40965 YDR034C-DYDR034C-D 5313 nt3.71□□□□□ -1.82
MSH4P40965 STU2YLR045C 2667 nt3.71□□□□□ -1.82
MSH4P40965 FAA2YER015W 2235 nt3.71□□□□□ -1.82
MSH4P40965 NTO1YPR031W 2247 nt3.71□□□□□ -1.82
MSH4P40965 NOP4YPL043W 2058 nt3.71□□□□□ -1.82
MSH4P40965 OSW7YFR039C 1533 nt3.7□□□□□ -1.82
MSH4P40965 MCD1YDL003W 1701 nt3.7□□□□□ -1.82
MSH4P40965 CSR2YPR030W 3366 nt3.7□□□□□ -1.82
MSH4P40965 RPS22BYLR367W 393 nt3.7□□□□□ -1.82
MSH4P40965 YNL205CYNL205C 423 nt3.7□□□□□ -1.82
MSH4P40965 YOL155W-AYOL155W-A 135 nt3.7□□□□□ -1.82
MSH4P40965 IES4YOR189W 351 nt3.7□□□□□ -1.82
MSH4P40965 RCY1YJL204C 2523 nt3.7□□□□□ -1.82
MSH4P40965 TFB1YDR311W 1929 nt3.7□□□□□ -1.82
MSH4P40965 POL2YNL262W 6669 nt3.69□□□□□ -1.82
MSH4P40965 PRK1YIL095W 2433 nt3.69□□□□□ -1.82
MSH4P40965 YEL020C-BYEL020C-B 198 nt3.69□□□□□ -1.82
MSH4P40965 STE6YKL209C 3873 nt3.69□□□□□ -1.82
MSH4P40965 IOC3YFR013W 2364 nt3.68□□□□□ -1.82
MSH4P40965 HTL1YCR020W-B 237 nt3.68□□□□□ -1.82
MSH4P40965 YFH1YDL120W 525 nt3.68□□□□□ -1.82
MSH4P40965 ALG13YGL047W 609 nt3.68□□□□□ -1.82
MSH4P40965 COX1Q0045 1605 nt3.68□□□□□ -1.82
MSH4P40965 AUS1YOR011W 4185 nt3.68□□□□□ -1.82
MSH4P40965 YHR078WYHR078W 1659 nt3.68□□□□□ -1.82
MSH4P40965 RRM3YHR031C 2172 nt3.68□□□□□ -1.82
MSH4P40965 HCS1YKL017C 2052 nt3.67□□□□□ -1.82
MSH4P40965 MET10YFR030W 3108 nt3.67□□□□□ -1.82
MSH4P40965 RPL35AYDL191W 363 nt3.67□□□□□ -1.82
MSH4P40965 GPI14YJR013W 1212 nt3.67□□□□□ -1.82
MSH4P40965 YAL059C-AYAL059C-A 423 nt3.67□□□□□ -1.82
MSH4P40965 YOR050CYOR050C 348 nt3.67□□□□□ -1.82
MSH4P40965 CCT7YJL111W 1653 nt3.67□□□□□ -1.82
MSH4P40965 GIS4YML006C 2325 nt3.67□□□□□ -1.82
MSH4P40965 BIT61YJL058C 1632 nt3.66□□□□□ -1.82
MSH4P40965 ENA5YDR038C 3276 nt3.66□□□□□ -1.82
MSH4P40965 YDL062WYDL062W 426 nt3.66□□□□□ -1.82
MSH4P40965 tT(UGU)Q1tT(UGU)Q1 76 nt3.66□□□□□ -1.82
MSH4P40965 COA4YLR218C 453 nt3.66□□□□□ -1.82
MSH4P40965 EXO84YBR102C 2262 nt3.66□□□□□ -1.82
MSH4P40965 DAD4YDR320C-A 219 nt3.65□□□□□ -1.83
MSH4P40965 HEM4YOR278W 828 nt3.65□□□□□ -1.83
MSH4P40965 MGR1YCL044C 1254 nt3.65□□□□□ -1.83
MSH4P40965 YDL011CYDL011C 324 nt3.64□□□□□ -1.83
MSH4P40965 MZM1YDR493W 372 nt3.64□□□□□ -1.83
MSH4P40965 ISU1YPL135W 498 nt3.64□□□□□ -1.83
MSH4P40965 CWC22YGR278W 1734 nt3.64□□□□□ -1.83
MSH4P40965 SGO1YOR073W 1773 nt3.63□□□□□ -1.83
MSH4P40965 NMA111YNL123W 2994 nt3.63□□□□□ -1.83
MSH4P40965 CHO2YGR157W 2610 nt3.63□□□□□ -1.83
MSH4P40965 TAO3YIL129C 7131 nt3.63□□□□□ -1.83
MSH4P40965 NAN1YPL126W 2691 nt3.63□□□□□ -1.83
MSH4P40965 RPA190YOR341W 4995 nt3.63□□□□□ -1.83
MSH4P40965 APC11YDL008W 498 nt3.63□□□□□ -1.83
MSH4P40965 TSA2YDR453C 591 nt3.63□□□□□ -1.83
MSH4P40965 TIM8YJR135W-A 264 nt3.63□□□□□ -1.83
MSH4P40965 PHD1YKL043W 1101 nt3.63□□□□□ -1.83
MSH4P40965 YLR154C-HYLR154C-H 132 nt3.63□□□□□ -1.83
MSH4P40965 YLR156C-AYLR156C-A 132 nt3.63□□□□□ -1.83
MSH4P40965 YLR157C-CYLR157C-C 132 nt3.63□□□□□ -1.83
MSH4P40965 YLR159C-AYLR159C-A 132 nt3.63□□□□□ -1.83
MSH4P40965 YOR008C-AYOR008C-A 225 nt3.63□□□□□ -1.83
MSH4P40965 snR191snR191 274 nt3.63□□□□□ -1.83
MSH4P40965 EPL1YFL024C 2499 nt3.63□□□□□ -1.83
MSH4P40965 VPS41YDR080W 2979 nt3.63□□□□□ -1.83
MSH4P40965 YDR210W-BYDR210W-B 5313 nt3.63□□□□□ -1.83
MSH4P40965 YDR261W-BYDR261W-B 5313 nt3.63□□□□□ -1.83
MSH4P40965 YFL002W-AYFL002W-A 5313 nt3.63□□□□□ -1.83
MSH4P40965 YGR161W-BYGR161W-B 5313 nt3.63□□□□□ -1.83
MSH4P40965 YLR410W-BYLR410W-B 5313 nt3.63□□□□□ -1.83
MSH4P40965 YCL019WYCL019W 5313 nt3.63□□□□□ -1.83
MSH4P40965 TFC1YBR123C 1950 nt3.62□□□□□ -1.83
MSH4P40965 DYN2YDR424C 279 nt3.62□□□□□ -1.83
MSH4P40965 RPL14BYHL001W 417 nt3.62□□□□□ -1.83
MSH4P40965 YOR072W-AYOR072W-A 249 nt3.62□□□□□ -1.83
MSH4P40965 RAD61YDR014W 1944 nt3.62□□□□□ -1.83
MSH4P40965 CIN8YEL061C 3003 nt3.62□□□□□ -1.83
MSH4P40965 YHR080CYHR080C 4038 nt3.61□□□□□ -1.83
MSH4P40965 YGR174W-AYGR174W-A 87 nt3.61□□□□□ -1.83
MSH4P40965 RPL20BYOR312C 519 nt3.61□□□□□ -1.83
MSH4P40965 YBR064WYBR064W 429 nt3.61□□□□□ -1.83
MSH4P40965 YJL016WYJL016W 1686 nt3.61□□□□□ -1.83
MSH4P40965 GCN1YGL195W 8019 nt3.6□□□□□ -1.83
MSH4P40965 CSN9YDR179C 489 nt3.6□□□□□ -1.83
MSH4P40965 CDH1YGL003C 1701 nt3.6□□□□□ -1.83
MSH4P40965 REV1YOR346W 2958 nt3.6□□□□□ -1.83
MSH4P40965 TPS2YDR074W 2691 nt3.59□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 121.7 ms