Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YHR130CYHR130C 336 nt2.78□□□□□ -1.96
SSM4P40318 HYR1YIR037W 492 nt2.78□□□□□ -1.96
SSM4P40318 MRPL33YMR286W 261 nt2.78□□□□□ -1.96
SSM4P40318 RPL25YOL127W 429 nt2.78□□□□□ -1.96
SSM4P40318 YBR197CYBR197C 654 nt2.78□□□□□ -1.96
SSM4P40318 JSN1YJR091C 3276 nt2.78□□□□□ -1.96
SSM4P40318 SET2YJL168C 2202 nt2.77□□□□□ -1.97
SSM4P40318 ASM4YDL088C 1587 nt2.77□□□□□ -1.97
SSM4P40318 YCR001WYCR001W 315 nt2.77□□□□□ -1.97
SSM4P40318 RPS1AYLR441C 768 nt2.77□□□□□ -1.97
SSM4P40318 CTK3YML112W 891 nt2.77□□□□□ -1.97
SSM4P40318 GPI15YNL038W 690 nt2.77□□□□□ -1.97
SSM4P40318 ATX2YOR079C 942 nt2.77□□□□□ -1.97
SSM4P40318 YBR076C-AYBR076C-A 267 nt2.77□□□□□ -1.97
SSM4P40318 PSK2YOL045W 3306 nt2.77□□□□□ -1.97
SSM4P40318 PRP6YBR055C 2700 nt2.77□□□□□ -1.97
SSM4P40318 YBT1YLL048C 4986 nt2.77□□□□□ -1.97
SSM4P40318 RLI1YDR091C 1827 nt2.76□□□□□ -1.97
SSM4P40318 YGL165CYGL165C 579 nt2.76□□□□□ -1.97
SSM4P40318 COX13YGL191W 390 nt2.76□□□□□ -1.97
SSM4P40318 RPF1YHR088W 888 nt2.76□□□□□ -1.97
SSM4P40318 YIL030W-AYIL030W-A 339 nt2.76□□□□□ -1.97
SSM4P40318 YKL068W-AYKL068W-A 237 nt2.76□□□□□ -1.97
SSM4P40318 IRC16YPR038W 360 nt2.76□□□□□ -1.97
SSM4P40318 YPR203WYPR203W 309 nt2.76□□□□□ -1.97
SSM4P40318 ROY1YMR258C 1662 nt2.76□□□□□ -1.97
SSM4P40318 INP51YIL002C 2841 nt2.75□□□□□ -1.97
SSM4P40318 YEL018C-AYEL018C-A 534 nt2.75□□□□□ -1.97
SSM4P40318 YLR458WYLR458W 381 nt2.75□□□□□ -1.97
SSM4P40318 URA10YMR271C 684 nt2.75□□□□□ -1.97
SSM4P40318 YPR145C-AYPR145C-A 237 nt2.75□□□□□ -1.97
SSM4P40318 YPR089WYPR089W 2667 nt2.75□□□□□ -1.97
SSM4P40318 YJL016WYJL016W 1686 nt2.75□□□□□ -1.97
SSM4P40318 YHR214C-CYHR214C-C 1437 nt2.75□□□□□ -1.97
SSM4P40318 BNA7YDR428C 786 nt2.74□□□□□ -1.97
SSM4P40318 YGR050CYGR050C 357 nt2.74□□□□□ -1.97
SSM4P40318 BIG1YHR101C 1008 nt2.74□□□□□ -1.97
SSM4P40318 YPL197CYPL197C 414 nt2.74□□□□□ -1.97
SSM4P40318 SPE1YKL184W 1401 nt2.74□□□□□ -1.97
SSM4P40318 ISW1YBR245C 3390 nt2.74□□□□□ -1.97
SSM4P40318 SAK1YER129W 3429 nt2.74□□□□□ -1.97
SSM4P40318 GIP3YPL137C 3831 nt2.74□□□□□ -1.97
SSM4P40318 TOR1YJR066W 7413 nt2.73□□□□□ -1.97
SSM4P40318 YER084W-AYER084W-A 513 nt2.73□□□□□ -1.97
SSM4P40318 YJL007CYJL007C 315 nt2.73□□□□□ -1.97
SSM4P40318 RPL37AYLR185W 267 nt2.73□□□□□ -1.97
SSM4P40318 NOP14YDL148C 2433 nt2.73□□□□□ -1.97
SSM4P40318 BRO1YPL084W 2535 nt2.73□□□□□ -1.97
SSM4P40318 YPS5YGL259W 498 nt2.72□□□□□ -1.97
SSM4P40318 RPL40AYIL148W 387 nt2.72□□□□□ -1.97
SSM4P40318 RAM2YKL019W 951 nt2.72□□□□□ -1.97
SSM4P40318 PKR1YMR123W 369 nt2.72□□□□□ -1.97
SSM4P40318 YOR105WYOR105W 327 nt2.72□□□□□ -1.97
SSM4P40318 MGR1YCL044C 1254 nt2.72□□□□□ -1.97
SSM4P40318 KIP1YBL063W 3336 nt2.72□□□□□ -1.97
SSM4P40318 BI2Q0110 1272 nt2.71□□□□□ -1.98
SSM4P40318 YLR171WYLR171W 390 nt2.71□□□□□ -1.98
SSM4P40318 SYM1YLR251W 594 nt2.71□□□□□ -1.98
SSM4P40318 KSP1YHR082C 3090 nt2.71□□□□□ -1.98
SSM4P40318 NUP120YKL057C 3114 nt2.71□□□□□ -1.98
SSM4P40318 TOP2YNL088W 4287 nt2.71□□□□□ -1.98
SSM4P40318 PRK1YIL095W 2433 nt2.71□□□□□ -1.98
SSM4P40318 ACB1YGR037C 264 nt2.7□□□□□ -1.98
SSM4P40318 YJR079WYJR079W 330 nt2.7□□□□□ -1.98
SSM4P40318 YMR272W-BYMR272W-B 108 nt2.7□□□□□ -1.98
SSM4P40318 RPS7BYNL096C 573 nt2.7□□□□□ -1.98
SSM4P40318 CBF2YGR140W 2871 nt2.7□□□□□ -1.98
SSM4P40318 SLH1YGR271W 5904 nt2.7□□□□□ -1.98
SSM4P40318 YPK1YKL126W 2043 nt2.7□□□□□ -1.98
SSM4P40318 PES4YFR023W 1836 nt2.7□□□□□ -1.98
SSM4P40318 RVS161YCR009C 798 nt2.69□□□□□ -1.98
SSM4P40318 YJL127C-BYJL127C-B 159 nt2.69□□□□□ -1.98
SSM4P40318 YLR222C-AYLR222C-A 231 nt2.69□□□□□ -1.98
SSM4P40318 RPS29AYLR388W 171 nt2.69□□□□□ -1.98
SSM4P40318 FAR11YNL127W 2862 nt2.69□□□□□ -1.98
SSM4P40318 SEC16YPL085W 6588 nt2.69□□□□□ -1.98
SSM4P40318 SDC1YDR469W 528 nt2.68□□□□□ -1.98
SSM4P40318 SMB1YER029C 591 nt2.68□□□□□ -1.98
SSM4P40318 YER119C-AYER119C-A 372 nt2.68□□□□□ -1.98
SSM4P40318 DDR48YMR173W 1293 nt2.68□□□□□ -1.98
SSM4P40318 HOS4YIL112W 3252 nt2.68□□□□□ -1.98
SSM4P40318 SKT5YBL061C 2091 nt2.68□□□□□ -1.98
SSM4P40318 KOG1YHR186C 4674 nt2.68□□□□□ -1.98
SSM4P40318 YBR012W-AYBR012W-A 1323 nt2.68□□□□□ -1.98
SSM4P40318 YOR142W-AYOR142W-A 1323 nt2.68□□□□□ -1.98
SSM4P40318 YOR192C-AYOR192C-A 1317 nt2.68□□□□□ -1.98
SSM4P40318 YPR158W-AYPR158W-A 1323 nt2.68□□□□□ -1.98
SSM4P40318 RPI1YIL119C 1224 nt2.68□□□□□ -1.98
SSM4P40318 TIM8YJR135W-A 264 nt2.68□□□□□ -1.98
SSM4P40318 YJR140W-AYJR140W-A 150 nt2.68□□□□□ -1.98
SSM4P40318 YLR379WYLR379W 375 nt2.68□□□□□ -1.98
SSM4P40318 NOP15YNL110C 663 nt2.68□□□□□ -1.98
SSM4P40318 FYV12YOR183W 390 nt2.68□□□□□ -1.98
SSM4P40318 HSC82YMR186W 2118 nt2.67□□□□□ -1.98
SSM4P40318 MMS22YLR320W 4365 nt2.67□□□□□ -1.98
SSM4P40318 VPS16YPL045W 2397 nt2.67□□□□□ -1.98
SSM4P40318 RMP1YLR145W 606 nt2.67□□□□□ -1.98
SSM4P40318 IGO1YNL157W 507 nt2.67□□□□□ -1.98
SSM4P40318 YOL159C-AYOL159C-A 273 nt2.67□□□□□ -1.98
SSM4P40318 YPL205CYPL205C 345 nt2.67□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms