Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 YHR032C-AYHR032C-A 120 nt5.48□□□□□ -1.53
PTP3P40048 YML007C-AYML007C-A 111 nt5.48□□□□□ -1.53
PTP3P40048 YNL034WYNL034W 1839 nt5.48□□□□□ -1.53
PTP3P40048 NCL1YBL024W 2055 nt5.47□□□□□ -1.53
PTP3P40048 LOS1YKL205W 3303 nt5.47□□□□□ -1.53
PTP3P40048 LEU3YLR451W 2661 nt5.47□□□□□ -1.53
PTP3P40048 MUK1YPL070W 1839 nt5.47□□□□□ -1.53
PTP3P40048 RBK1YCR036W 1002 nt5.47□□□□□ -1.53
PTP3P40048 RPL28YGL103W 450 nt5.47□□□□□ -1.53
PTP3P40048 YPR146CYPR146C 330 nt5.47□□□□□ -1.53
PTP3P40048 GDB1YPR184W 4611 nt5.47□□□□□ -1.53
PTP3P40048 GYL1YMR192W 2163 nt5.47□□□□□ -1.53
PTP3P40048 IPT1YDR072C 1584 nt5.46□□□□□ -1.53
PTP3P40048 RAD4YER162C 2265 nt5.46□□□□□ -1.53
PTP3P40048 DOA4YDR069C 2781 nt5.46□□□□□ -1.53
PTP3P40048 OSH2YDL019C 3852 nt5.46□□□□□ -1.54
PTP3P40048 SED4YCR067C 3198 nt5.46□□□□□ -1.54
PTP3P40048 SOD1YJR104C 465 nt5.46□□□□□ -1.54
PTP3P40048 YOL057WYOL057W 2136 nt5.46□□□□□ -1.54
PTP3P40048 snR191snR191 274 nt5.46□□□□□ -1.54
PTP3P40048 YRM1YOR172W 2361 nt5.46□□□□□ -1.54
PTP3P40048 TAF5YBR198C 2397 nt5.46□□□□□ -1.54
PTP3P40048 CAF130YGR134W 3369 nt5.46□□□□□ -1.54
PTP3P40048 PWP2YCR057C 2772 nt5.45□□□□□ -1.54
PTP3P40048 ECM5YMR176W 4236 nt5.45□□□□□ -1.54
PTP3P40048 GIS2YNL255C 462 nt5.44□□□□□ -1.54
PTP3P40048 RAD16YBR114W 2373 nt5.44□□□□□ -1.54
PTP3P40048 BZZ1YHR114W 1902 nt5.44□□□□□ -1.54
PTP3P40048 GCD6YDR211W 2139 nt5.44□□□□□ -1.54
PTP3P40048 RSC1YGR056W 2787 nt5.44□□□□□ -1.54
PTP3P40048 VTH1YIL173W 4650 nt5.43□□□□□ -1.54
PTP3P40048 VTH2YJL222W 4650 nt5.43□□□□□ -1.54
PTP3P40048 CLF1YLR117C 2064 nt5.43□□□□□ -1.54
PTP3P40048 BCK2YER167W 2556 nt5.42□□□□□ -1.54
PTP3P40048 snR10snR10 245 nt5.42□□□□□ -1.54
PTP3P40048 YBR099CYBR099C 384 nt5.42□□□□□ -1.54
PTP3P40048 SIP3YNL257C 3690 nt5.42□□□□□ -1.54
PTP3P40048 VTC4YJL012C 2166 nt5.42□□□□□ -1.54
PTP3P40048 ETP1YHL010C 1758 nt5.41□□□□□ -1.54
PTP3P40048 LRG1YDL240W 3054 nt5.41□□□□□ -1.54
PTP3P40048 NPR1YNL183C 2373 nt5.4□□□□□ -1.54
PTP3P40048 ECM12YHR021W-A 456 nt5.4□□□□□ -1.54
PTP3P40048 NOP53YPL146C 1368 nt5.4□□□□□ -1.55
PTP3P40048 YKL162C-AYKL162C-A 153 nt5.39□□□□□ -1.55
PTP3P40048 RPL22AYLR061W 366 nt5.39□□□□□ -1.55
PTP3P40048 EGT2YNL327W 3126 nt5.39□□□□□ -1.55
PTP3P40048 POM152YMR129W 4014 nt5.39□□□□□ -1.55
PTP3P40048 APC11YDL008W 498 nt5.38□□□□□ -1.55
PTP3P40048 COX23YHR116W 456 nt5.38□□□□□ -1.55
PTP3P40048 RSM19YNR037C 276 nt5.38□□□□□ -1.55
PTP3P40048 YDR341CYDR341C 1824 nt5.38□□□□□ -1.55
PTP3P40048 UBA1YKL210W 3075 nt5.37□□□□□ -1.55
PTP3P40048 RPS17BYDR447C 411 nt5.37□□□□□ -1.55
PTP3P40048 YML116W-AYML116W-A 303 nt5.37□□□□□ -1.55
PTP3P40048 KIC1YHR102W 3243 nt5.36□□□□□ -1.55
PTP3P40048 BAS1YKR099W 2436 nt5.35□□□□□ -1.55
PTP3P40048 NUP2YLR335W 2163 nt5.35□□□□□ -1.55
PTP3P40048 SEG2YKL105C 3399 nt5.34□□□□□ -1.55
PTP3P40048 YLR282CYLR282C 342 nt5.34□□□□□ -1.55
PTP3P40048 YOR073W-AYOR073W-A 234 nt5.34□□□□□ -1.55
PTP3P40048 TIM12YBR091C 330 nt5.34□□□□□ -1.55
PTP3P40048 YLL066W-BYLL066W-B 171 nt5.33□□□□□ -1.56
PTP3P40048 RPL20BYOR312C 519 nt5.33□□□□□ -1.56
PTP3P40048 YBR221W-AYBR221W-A 105 nt5.33□□□□□ -1.56
PTP3P40048 YCG1YDR325W 3108 nt5.32□□□□□ -1.56
PTP3P40048 DNF2YDR093W 4839 nt5.32□□□□□ -1.56
PTP3P40048 YDR545C-AYDR545C-A 480 nt5.32□□□□□ -1.56
PTP3P40048 COX14YML129C 213 nt5.32□□□□□ -1.56
PTP3P40048 ZDS1YMR273C 2748 nt5.32□□□□□ -1.56
PTP3P40048 ROG3YFR022W 2202 nt5.31□□□□□ -1.56
PTP3P40048 YBR121C-AYBR121C-A 159 nt5.31□□□□□ -1.56
PTP3P40048 YEL043WYEL043W 2871 nt5.31□□□□□ -1.56
PTP3P40048 SPT21YMR179W 2277 nt5.31□□□□□ -1.56
PTP3P40048 VMA1YDL185W 3216 nt5.31□□□□□ -1.56
PTP3P40048 TEL1YBL088C 8364 nt5.31□□□□□ -1.56
PTP3P40048 BNI4YNL233W 2679 nt5.3□□□□□ -1.56
PTP3P40048 DFG16YOR030W 1860 nt5.3□□□□□ -1.56
PTP3P40048 REG1YDR028C 3045 nt5.3□□□□□ -1.56
PTP3P40048 YOR102WYOR102W 351 nt5.3□□□□□ -1.56
PTP3P40048 APL4YPR029C 2499 nt5.3□□□□□ -1.56
PTP3P40048 USA1YML029W 2517 nt5.29□□□□□ -1.56
PTP3P40048 SKT5YBL061C 2091 nt5.29□□□□□ -1.56
PTP3P40048 YIR044CYIR044C 186 nt5.29□□□□□ -1.56
PTP3P40048 RDN5-1RDN5-1 121 nt5.29□□□□□ -1.56
PTP3P40048 RDN5-6RDN5-6 121 nt5.29□□□□□ -1.56
PTP3P40048 CDC20YGL116W 1833 nt5.29□□□□□ -1.56
PTP3P40048 CCM1YGR150C 2595 nt5.29□□□□□ -1.56
PTP3P40048 TMN3YER113C 2121 nt5.29□□□□□ -1.56
PTP3P40048 MMS22YLR320W 4365 nt5.28□□□□□ -1.56
PTP3P40048 YCR095W-AYCR095W-A 159 nt5.28□□□□□ -1.56
PTP3P40048 QCR7YDR529C 384 nt5.28□□□□□ -1.56
PTP3P40048 YPR003CYPR003C 2265 nt5.28□□□□□ -1.56
PTP3P40048 MCM6YGL201C 3054 nt5.28□□□□□ -1.56
PTP3P40048 OLE1YGL055W 1533 nt5.28□□□□□ -1.56
PTP3P40048 HEH2YDR458C 1992 nt5.27□□□□□ -1.57
PTP3P40048 YMR31YFR049W 372 nt5.27□□□□□ -1.57
PTP3P40048 tQ(UUG)CtQ(UUG)C 72 nt5.27□□□□□ -1.57
PTP3P40048 tQ(UUG)D1tQ(UUG)D1 72 nt5.27□□□□□ -1.57
PTP3P40048 tQ(UUG)D2tQ(UUG)D2 72 nt5.27□□□□□ -1.57
PTP3P40048 tQ(UUG)D3tQ(UUG)D3 72 nt5.27□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms