Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 PKR1YMR123W 369 nt0.76□□□□□ -2.29
RPB11P38902 AME1YBR211C 975 nt0.76□□□□□ -2.29
RPB11P38902 DAS1YJL149W 1992 nt0.76□□□□□ -2.29
RPB11P38902 SMD1YGR074W 441 nt0.75□□□□□ -2.29
RPB11P38902 GIC1YHR061C 945 nt0.75□□□□□ -2.29
RPB11P38902 LSM7YNL147W 348 nt0.75□□□□□ -2.29
RPB11P38902 ERP4YOR016C 624 nt0.75□□□□□ -2.29
RPB11P38902 SUT2YPR009W 807 nt0.75□□□□□ -2.29
RPB11P38902 CUR1YPR158W 759 nt0.75□□□□□ -2.29
RPB11P38902 EAF1YDR359C 2949 nt0.75□□□□□ -2.29
RPB11P38902 VPS54YDR027C 2670 nt0.75□□□□□ -2.29
RPB11P38902 NUP188YML103C 4968 nt0.74□□□□□ -2.29
RPB11P38902 SEF1YBL066C 3447 nt0.74□□□□□ -2.29
RPB11P38902 YNL226WYNL226W 411 nt0.74□□□□□ -2.29
RPB11P38902 TRM732YMR259C 4263 nt0.74□□□□□ -2.29
RPB11P38902 IFH1YLR223C 3258 nt0.73□□□□□ -2.29
RPB11P38902 SNU23YDL098C 585 nt0.73□□□□□ -2.29
RPB11P38902 SNA4YDL123W 423 nt0.73□□□□□ -2.29
RPB11P38902 SAC3YDR159W 3906 nt0.73□□□□□ -2.29
RPB11P38902 YHR214C-CYHR214C-C 1437 nt0.72□□□□□ -2.29
RPB11P38902 SMY1YKL079W 1971 nt0.72□□□□□ -2.29
RPB11P38902 PIG2YIL045W 1617 nt0.72□□□□□ -2.29
RPB11P38902 YCR102W-AYCR102W-A 198 nt0.72□□□□□ -2.29
RPB11P38902 YDR169C-AYDR169C-A 150 nt0.72□□□□□ -2.29
RPB11P38902 MEI4YER044C-A 1227 nt0.72□□□□□ -2.29
RPB11P38902 SDL1YIL167W 633 nt0.72□□□□□ -2.29
RPB11P38902 YJR023CYJR023C 402 nt0.72□□□□□ -2.29
RPB11P38902 RAM2YKL019W 951 nt0.72□□□□□ -2.29
RPB11P38902 YLL020CYLL020C 306 nt0.72□□□□□ -2.29
RPB11P38902 YOR376WYOR376W 369 nt0.72□□□□□ -2.29
RPB11P38902 MSC6YOR354C 2079 nt0.72□□□□□ -2.29
RPB11P38902 APM3YBR288C 1452 nt0.72□□□□□ -2.29
RPB11P38902 ZRG17YNR039C 1818 nt0.71□□□□□ -2.3
RPB11P38902 MAK10YEL053C 2202 nt0.71□□□□□ -2.3
RPB11P38902 YDL211CYDL211C 1119 nt0.71□□□□□ -2.3
RPB11P38902 VAB2YEL005C 849 nt0.71□□□□□ -2.3
RPB11P38902 YHR052W-AYHR052W-A 195 nt0.71□□□□□ -2.3
RPB11P38902 YHR054W-AYHR054W-A 195 nt0.71□□□□□ -2.3
RPB11P38902 SPC1YJR010C-A 285 nt0.71□□□□□ -2.3
RPB11P38902 YKE2YLR200W 345 nt0.71□□□□□ -2.3
RPB11P38902 snR14snR14 160 nt0.71□□□□□ -2.3
RPB11P38902 SCC2YDR180W 4482 nt0.71□□□□□ -2.3
RPB11P38902 ROM2YLR371W 4071 nt0.71□□□□□ -2.3
RPB11P38902 RLM1YPL089C 2031 nt0.71□□□□□ -2.3
RPB11P38902 KAP120YPL125W 3099 nt0.7□□□□□ -2.3
RPB11P38902 PRP38YGR075C 729 nt0.7□□□□□ -2.3
RPB11P38902 PRS3YHL011C 963 nt0.7□□□□□ -2.3
RPB11P38902 TIF11YMR260C 462 nt0.7□□□□□ -2.3
RPB11P38902 HCH1YNL281W 462 nt0.7□□□□□ -2.3
RPB11P38902 OST2YOR103C 393 nt0.7□□□□□ -2.3
RPB11P38902 SEC3YER008C 4011 nt0.7□□□□□ -2.3
RPB11P38902 SAS3YBL052C 2496 nt0.7□□□□□ -2.3
RPB11P38902 YDR290WYDR290W 330 nt0.69□□□□□ -2.3
RPB11P38902 FYV6YNL133C 522 nt0.69□□□□□ -2.3
RPB11P38902 SWM2YNR004W 441 nt0.69□□□□□ -2.3
RPB11P38902 YPL039WYPL039W 951 nt0.69□□□□□ -2.3
RPB11P38902 GPI2YPL076W 843 nt0.69□□□□□ -2.3
RPB11P38902 YPL135C-AYPL135C-A 174 nt0.69□□□□□ -2.3
RPB11P38902 TRS20YBR254C 528 nt0.69□□□□□ -2.3
RPB11P38902 SNF12YNR023W 1701 nt0.69□□□□□ -2.3
RPB11P38902 SPR3YGR059W 1539 nt0.69□□□□□ -2.3
RPB11P38902 RIC1YLR039C 3171 nt0.68□□□□□ -2.3
RPB11P38902 RPN9YDR427W 1182 nt0.68□□□□□ -2.3
RPB11P38902 YER088C-AYER088C-A 324 nt0.68□□□□□ -2.3
RPB11P38902 VPS25YJR102C 609 nt0.68□□□□□ -2.3
RPB11P38902 TAP42YMR028W 1101 nt0.68□□□□□ -2.3
RPB11P38902 PAU24YBR301W 363 nt0.68□□□□□ -2.3
RPB11P38902 YDR261W-AYDR261W-A 1317 nt0.67□□□□□ -2.3
RPB11P38902 CTF13YMR094W 1437 nt0.67□□□□□ -2.3
RPB11P38902 GIC2YDR309C 1152 nt0.67□□□□□ -2.3
RPB11P38902 YFR032C-BYFR032C-B 264 nt0.67□□□□□ -2.3
RPB11P38902 YHL009W-AYHL009W-A 1242 nt0.67□□□□□ -2.3
RPB11P38902 YNR021WYNR021W 1215 nt0.67□□□□□ -2.3
RPB11P38902 VID24YBR105C 1089 nt0.67□□□□□ -2.3
RPB11P38902 SPP381YBR152W 876 nt0.67□□□□□ -2.3
RPB11P38902 ERV15YBR210W 429 nt0.67□□□□□ -2.3
RPB11P38902 YDR338CYDR338C 2088 nt0.67□□□□□ -2.3
RPB11P38902 NUR1YDL089W 1455 nt0.67□□□□□ -2.3
RPB11P38902 TTI1YKL033W 3117 nt0.67□□□□□ -2.3
RPB11P38902 YJR098CYJR098C 1971 nt0.66□□□□□ -2.3
RPB11P38902 IML1YJR138W 4755 nt0.66□□□□□ -2.3
RPB11P38902 YGR130CYGR130C 2451 nt0.66□□□□□ -2.3
RPB11P38902 NSE3YDR288W 912 nt0.66□□□□□ -2.3
RPB11P38902 YER046W-AYER046W-A 330 nt0.66□□□□□ -2.3
RPB11P38902 YJL032WYJL032W 315 nt0.66□□□□□ -2.3
RPB11P38902 YMR242W-AYMR242W-A 90 nt0.66□□□□□ -2.3
RPB11P38902 LDH1YBR204C 1128 nt0.66□□□□□ -2.3
RPB11P38902 RRP7YCL031C 894 nt0.66□□□□□ -2.3
RPB11P38902 DOP1YDR141C 5097 nt0.65□□□□□ -2.3
RPB11P38902 YML003WYML003W 873 nt0.65□□□□□ -2.31
RPB11P38902 FAR3YMR052W 615 nt0.65□□□□□ -2.31
RPB11P38902 ATX1YNL259C 222 nt0.65□□□□□ -2.31
RPB11P38902 YNR068CYNR068C 819 nt0.65□□□□□ -2.31
RPB11P38902 NSL1YPL233W 651 nt0.65□□□□□ -2.31
RPB11P38902 YPR117WYPR117W 7470 nt0.65□□□□□ -2.31
RPB11P38902 REV3YPL167C 4515 nt0.65□□□□□ -2.31
RPB11P38902 IRR1YIL026C 3453 nt0.65□□□□□ -2.31
RPB11P38902 KIP1YBL063W 3336 nt0.64□□□□□ -2.31
RPB11P38902 EMC5YIL027C 426 nt0.64□□□□□ -2.31
RPB11P38902 IRC23YOR044W 474 nt0.64□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 82.7 ms