Protein–RNA interactions for Protein: P36130

CAF4, CCR4-associated factor 4, yeastyeast

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF4P36130 HMI1YOL095C 2121 nt1.32□□□□□ -2.2
CAF4P36130 YOL150CYOL150C 312 nt1.32□□□□□ -2.2
CAF4P36130 SFG1YOR315W 1041 nt1.32□□□□□ -2.2
CAF4P36130 TYE7YOR344C 876 nt1.32□□□□□ -2.2
CAF4P36130 ASM4YDL088C 1587 nt1.32□□□□□ -2.2
CAF4P36130 VMR1YHL035C 4779 nt1.32□□□□□ -2.2
CAF4P36130 MSH3YCR092C 3057 nt1.32□□□□□ -2.2
CAF4P36130 YLR419WYLR419W 4308 nt1.32□□□□□ -2.2
CAF4P36130 MAD1YGL086W 2250 nt1.32□□□□□ -2.2
CAF4P36130 SEY1YOR165W 2331 nt1.31□□□□□ -2.2
CAF4P36130 REV3YPL167C 4515 nt1.31□□□□□ -2.2
CAF4P36130 YHL002C-AYHL002C-A 489 nt1.31□□□□□ -2.2
CAF4P36130 YHR214W-AYHR214W-A 486 nt1.31□□□□□ -2.2
CAF4P36130 HSK3YKL138C-A 210 nt1.31□□□□□ -2.2
CAF4P36130 YAR068WYAR068W 486 nt1.31□□□□□ -2.2
CAF4P36130 MTG1YMR097C 1104 nt1.31□□□□□ -2.2
CAF4P36130 YNR068CYNR068C 819 nt1.31□□□□□ -2.2
CAF4P36130 UFE1YOR075W 1041 nt1.31□□□□□ -2.2
CAF4P36130 SHS1YDL225W 1656 nt1.31□□□□□ -2.2
CAF4P36130 RVS161YCR009C 798 nt1.3□□□□□ -2.2
CAF4P36130 YGR242WYGR242W 309 nt1.3□□□□□ -2.2
CAF4P36130 YIL082WYIL082W 873 nt1.3□□□□□ -2.2
CAF4P36130 TAP42YMR028W 1101 nt1.3□□□□□ -2.2
CAF4P36130 MGR1YCL044C 1254 nt1.3□□□□□ -2.2
CAF4P36130 RSM23YGL129C 1353 nt1.3□□□□□ -2.2
CAF4P36130 PHR1YOR386W 1698 nt1.29□□□□□ -2.2
CAF4P36130 YHL037CYHL037C 402 nt1.29□□□□□ -2.2
CAF4P36130 ATP18YML081C-A 180 nt1.29□□□□□ -2.2
CAF4P36130 BST1YFL025C 3090 nt1.29□□□□□ -2.2
CAF4P36130 SLU7YDR088C 1149 nt1.28□□□□□ -2.2
CAF4P36130 YET1YKL065C 621 nt1.28□□□□□ -2.2
CAF4P36130 GRX8YLR364W 330 nt1.28□□□□□ -2.2
CAF4P36130 CMC2YBL059C-A 330 nt1.28□□□□□ -2.2
CAF4P36130 CDC25YLR310C 4770 nt1.27□□□□□ -2.21
CAF4P36130 CTF4YPR135W 2784 nt1.27□□□□□ -2.21
CAF4P36130 NOP53YPL146C 1368 nt1.27□□□□□ -2.21
CAF4P36130 YBR012W-AYBR012W-A 1323 nt1.27□□□□□ -2.21
CAF4P36130 YOR142W-AYOR142W-A 1323 nt1.27□□□□□ -2.21
CAF4P36130 YPR158W-AYPR158W-A 1323 nt1.27□□□□□ -2.21
CAF4P36130 RUB1YDR139C 234 nt1.27□□□□□ -2.21
CAF4P36130 ATC1YDR184C 885 nt1.27□□□□□ -2.21
CAF4P36130 TSA2YDR453C 591 nt1.27□□□□□ -2.21
CAF4P36130 BTN2YGR142W 1233 nt1.27□□□□□ -2.21
CAF4P36130 YJL127C-BYJL127C-B 159 nt1.27□□□□□ -2.21
CAF4P36130 MCM22YJR135C 720 nt1.27□□□□□ -2.21
CAF4P36130 DIA1YMR316W 1011 nt1.27□□□□□ -2.21
CAF4P36130 NGG1YDR176W 2109 nt1.27□□□□□ -2.21
CAF4P36130 RSM22YKL155C 1887 nt1.26□□□□□ -2.21
CAF4P36130 NDD1YOR372C 1665 nt1.26□□□□□ -2.21
CAF4P36130 APM3YBR288C 1452 nt1.26□□□□□ -2.21
CAF4P36130 KAP122YGL016W 3246 nt1.26□□□□□ -2.21
CAF4P36130 COX1Q0045 1605 nt1.26□□□□□ -2.21
CAF4P36130 YDR210W-AYDR210W-A 1317 nt1.25□□□□□ -2.21
CAF4P36130 YOR343W-AYOR343W-A 1317 nt1.25□□□□□ -2.21
CAF4P36130 SEC28YIL076W 891 nt1.25□□□□□ -2.21
CAF4P36130 YOL159CYOL159C 516 nt1.25□□□□□ -2.21
CAF4P36130 YOR169CYOR169C 465 nt1.25□□□□□ -2.21
CAF4P36130 DAS1YJL149W 1992 nt1.25□□□□□ -2.21
CAF4P36130 AHC1YOR023C 1701 nt1.24□□□□□ -2.21
CAF4P36130 DOT6YER088C 2013 nt1.24□□□□□ -2.21
CAF4P36130 YMR158C-AYMR158C-A 138 nt1.24□□□□□ -2.21
CAF4P36130 RIO2YNL207W 1278 nt1.24□□□□□ -2.21
CAF4P36130 YJR098CYJR098C 1971 nt1.24□□□□□ -2.21
CAF4P36130 YSW1YBR148W 1830 nt1.24□□□□□ -2.21
CAF4P36130 SPT14YPL175W 1359 nt1.23□□□□□ -2.21
CAF4P36130 GUP1YGL084C 1683 nt1.23□□□□□ -2.21
CAF4P36130 tH(GUG)E1tH(GUG)E1 72 nt1.23□□□□□ -2.21
CAF4P36130 tH(GUG)E2tH(GUG)E2 72 nt1.23□□□□□ -2.21
CAF4P36130 tH(GUG)G1tH(GUG)G1 72 nt1.23□□□□□ -2.21
CAF4P36130 tH(GUG)G2tH(GUG)G2 72 nt1.23□□□□□ -2.21
CAF4P36130 tH(GUG)HtH(GUG)H 72 nt1.23□□□□□ -2.21
CAF4P36130 tH(GUG)KtH(GUG)K 72 nt1.23□□□□□ -2.21
CAF4P36130 tH(GUG)MtH(GUG)M 72 nt1.23□□□□□ -2.21
CAF4P36130 SVP26YHR181W 687 nt1.23□□□□□ -2.21
CAF4P36130 PET123YOR158W 957 nt1.23□□□□□ -2.21
CAF4P36130 CDC27YBL084C 2277 nt1.23□□□□□ -2.21
CAF4P36130 ZRG8YER033C 3231 nt1.23□□□□□ -2.21
CAF4P36130 RAD9YDR217C 3930 nt1.22□□□□□ -2.21
CAF4P36130 IST3YIR005W 447 nt1.22□□□□□ -2.21
CAF4P36130 ERG29YMR134W 714 nt1.22□□□□□ -2.21
CAF4P36130 RPS16AYMR143W 432 nt1.22□□□□□ -2.21
CAF4P36130 TIF11YMR260C 462 nt1.22□□□□□ -2.21
CAF4P36130 YNL179CYNL179C 438 nt1.22□□□□□ -2.21
CAF4P36130 ALK1YGL021W 2283 nt1.22□□□□□ -2.21
CAF4P36130 IPI3YNL182C 1668 nt1.21□□□□□ -2.22
CAF4P36130 THG1YGR024C 714 nt1.21□□□□□ -2.22
CAF4P36130 YIL020C-AYIL020C-A 339 nt1.21□□□□□ -2.22
CAF4P36130 YNL226WYNL226W 411 nt1.21□□□□□ -2.22
CAF4P36130 RPL33BYOR234C 324 nt1.21□□□□□ -2.22
CAF4P36130 YPL034WYPL034W 498 nt1.21□□□□□ -2.22
CAF4P36130 YBR287WYBR287W 1284 nt1.21□□□□□ -2.22
CAF4P36130 BRO1YPL084W 2535 nt1.2□□□□□ -2.22
CAF4P36130 EST2YLR318W 2655 nt1.2□□□□□ -2.22
CAF4P36130 YDL009CYDL009C 324 nt1.2□□□□□ -2.22
CAF4P36130 NTF2YER009W 378 nt1.2□□□□□ -2.22
CAF4P36130 CIC1YHR052W 1131 nt1.2□□□□□ -2.22
CAF4P36130 GIC1YHR061C 945 nt1.2□□□□□ -2.22
CAF4P36130 RPS30AYLR287C-A 192 nt1.2□□□□□ -2.22
CAF4P36130 PGA1YNL158W 597 nt1.2□□□□□ -2.22
CAF4P36130 IRE1YHR079C 3348 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 111.2 ms