Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RPL40AYIL148W 387 nt2.79□□□□□ -1.96
MSH1P25846 YJL202CYJL202C 348 nt2.79□□□□□ -1.96
MSH1P25846 LCL2YLR104W 396 nt2.79□□□□□ -1.96
MSH1P25846 PEX17YNL214W 600 nt2.79□□□□□ -1.96
MSH1P25846 ARP8YOR141C 2646 nt2.79□□□□□ -1.96
MSH1P25846 VPS13YLL040C 9435 nt2.79□□□□□ -1.96
MSH1P25846 RNH70YGR276C 1662 nt2.79□□□□□ -1.96
MSH1P25846 DNF1YER166W 4716 nt2.78□□□□□ -1.96
MSH1P25846 YER006C-AYER006C-A 318 nt2.78□□□□□ -1.96
MSH1P25846 NBL1YHR199C-A 222 nt2.78□□□□□ -1.96
MSH1P25846 RAM2YKL019W 951 nt2.78□□□□□ -1.96
MSH1P25846 IRC19YLL033W 693 nt2.78□□□□□ -1.96
MSH1P25846 CMC2YBL059C-A 330 nt2.78□□□□□ -1.96
MSH1P25846 RPL25YOL127W 429 nt2.78□□□□□ -1.96
MSH1P25846 YOL159CYOL159C 516 nt2.78□□□□□ -1.96
MSH1P25846 PRP6YBR055C 2700 nt2.78□□□□□ -1.96
MSH1P25846 HRD3YLR207W 2502 nt2.78□□□□□ -1.96
MSH1P25846 YBL005W-BYBL005W-B 5268 nt2.78□□□□□ -1.96
MSH1P25846 SAK1YER129W 3429 nt2.78□□□□□ -1.96
MSH1P25846 YPK1YKL126W 2043 nt2.77□□□□□ -1.97
MSH1P25846 ERP6YGL002W 651 nt2.77□□□□□ -1.97
MSH1P25846 YKL111CYKL111C 336 nt2.77□□□□□ -1.97
MSH1P25846 YAR047CYAR047C 321 nt2.77□□□□□ -1.97
MSH1P25846 AIM32YML050W 936 nt2.77□□□□□ -1.97
MSH1P25846 YBR012CYBR012C 420 nt2.77□□□□□ -1.97
MSH1P25846 YPR089WYPR089W 2667 nt2.77□□□□□ -1.97
MSH1P25846 PES4YFR023W 1836 nt2.77□□□□□ -1.97
MSH1P25846 YER135CYER135C 393 nt2.76□□□□□ -1.97
MSH1P25846 RPC10YHR143W-A 213 nt2.76□□□□□ -1.97
MSH1P25846 tT(UGU)Q1tT(UGU)Q1 76 nt2.76□□□□□ -1.97
MSH1P25846 YOL134CYOL134C 390 nt2.76□□□□□ -1.97
MSH1P25846 NUP120YKL057C 3114 nt2.75□□□□□ -1.97
MSH1P25846 ATG31YDR022C 591 nt2.75□□□□□ -1.97
MSH1P25846 HYP2YEL034W 474 nt2.75□□□□□ -1.97
MSH1P25846 YHR214W-AYHR214W-A 486 nt2.75□□□□□ -1.97
MSH1P25846 YAR068WYAR068W 486 nt2.75□□□□□ -1.97
MSH1P25846 MRPL33YMR286W 261 nt2.75□□□□□ -1.97
MSH1P25846 YOR029WYOR029W 336 nt2.75□□□□□ -1.97
MSH1P25846 AYT1YLL063C 1425 nt2.75□□□□□ -1.97
MSH1P25846 KSP1YHR082C 3090 nt2.74□□□□□ -1.97
MSH1P25846 CAJ1YER048C 1176 nt2.74□□□□□ -1.97
MSH1P25846 YER188C-AYER188C-A 300 nt2.74□□□□□ -1.97
MSH1P25846 CRG1YHR209W 876 nt2.74□□□□□ -1.97
MSH1P25846 YNL058CYNL058C 951 nt2.74□□□□□ -1.97
MSH1P25846 YPL276WYPL276W 438 nt2.74□□□□□ -1.97
MSH1P25846 YJL181WYJL181W 1836 nt2.74□□□□□ -1.97
MSH1P25846 INP51YIL002C 2841 nt2.74□□□□□ -1.97
MSH1P25846 YBT1YLL048C 4986 nt2.73□□□□□ -1.97
MSH1P25846 YDL068WYDL068W 330 nt2.73□□□□□ -1.97
MSH1P25846 SWF1YDR126W 1011 nt2.73□□□□□ -1.97
MSH1P25846 ATP17YDR377W 306 nt2.73□□□□□ -1.97
MSH1P25846 NUP82YJL061W 2142 nt2.73□□□□□ -1.97
MSH1P25846 NCE101YJL205C 162 nt2.73□□□□□ -1.97
MSH1P25846 ATP15YPL271W 189 nt2.73□□□□□ -1.97
MSH1P25846 YPR039WYPR039W 336 nt2.73□□□□□ -1.97
MSH1P25846 YOL098CYOL098C 3114 nt2.73□□□□□ -1.97
MSH1P25846 PDR1YGL013C 3207 nt2.73□□□□□ -1.97
MSH1P25846 SVL3YPL032C 2478 nt2.73□□□□□ -1.97
MSH1P25846 ACB1YGR037C 264 nt2.72□□□□□ -1.97
MSH1P25846 YGR121W-AYGR121W-A 216 nt2.72□□□□□ -1.97
MSH1P25846 CCW14YLR390W-A 717 nt2.72□□□□□ -1.97
MSH1P25846 RPS1AYLR441C 768 nt2.72□□□□□ -1.97
MSH1P25846 YBL071CYBL071C 309 nt2.72□□□□□ -1.97
MSH1P25846 RLI1YDR091C 1827 nt2.72□□□□□ -1.97
MSH1P25846 VPS64YDR200C 1815 nt2.72□□□□□ -1.97
MSH1P25846 YHR078WYHR078W 1659 nt2.72□□□□□ -1.97
MSH1P25846 MMS22YLR320W 4365 nt2.72□□□□□ -1.97
MSH1P25846 PRK1YIL095W 2433 nt2.71□□□□□ -1.98
MSH1P25846 INP53YOR109W 3324 nt2.71□□□□□ -1.98
MSH1P25846 YCR064CYCR064C 411 nt2.71□□□□□ -1.98
MSH1P25846 YGR050CYGR050C 357 nt2.71□□□□□ -1.98
MSH1P25846 YML084WYML084W 309 nt2.71□□□□□ -1.98
MSH1P25846 PRE8YML092C 753 nt2.71□□□□□ -1.98
MSH1P25846 KTI11YBL071W-A 249 nt2.71□□□□□ -1.98
MSH1P25846 YOR055WYOR055W 435 nt2.71□□□□□ -1.98
MSH1P25846 TSC3YBR058C-A 243 nt2.71□□□□□ -1.98
MSH1P25846 SPF1YEL031W 3648 nt2.71□□□□□ -1.98
MSH1P25846 YPL150WYPL150W 2706 nt2.7□□□□□ -1.98
MSH1P25846 AMS1YGL156W 3252 nt2.7□□□□□ -1.98
MSH1P25846 DNA2YHR164C 4569 nt2.7□□□□□ -1.98
MSH1P25846 YGR025WYGR025W 303 nt2.7□□□□□ -1.98
MSH1P25846 YAL068W-AYAL068W-A 255 nt2.7□□□□□ -1.98
MSH1P25846 YNL277W-AYNL277W-A 189 nt2.7□□□□□ -1.98
MSH1P25846 snR13snR13 124 nt2.7□□□□□ -1.98
MSH1P25846 TRA1YHR099W 11235 nt2.7□□□□□ -1.98
MSH1P25846 TOP2YNL088W 4287 nt2.7□□□□□ -1.98
MSH1P25846 YJL016WYJL016W 1686 nt2.69□□□□□ -1.98
MSH1P25846 NAN1YPL126W 2691 nt2.69□□□□□ -1.98
MSH1P25846 SGS1YMR190C 4344 nt2.69□□□□□ -1.98
MSH1P25846 YML037CYML037C 1023 nt2.69□□□□□ -1.98
MSH1P25846 CDC33YOL139C 642 nt2.69□□□□□ -1.98
MSH1P25846 YBR032WYBR032W 303 nt2.69□□□□□ -1.98
MSH1P25846 GPX2YBR244W 489 nt2.69□□□□□ -1.98
MSH1P25846 YBR285WYBR285W 435 nt2.69□□□□□ -1.98
MSH1P25846 VPS16YPL045W 2397 nt2.68□□□□□ -1.98
MSH1P25846 PTC5YOR090C 1719 nt2.68□□□□□ -1.98
MSH1P25846 RPO41YFL036W 4056 nt2.68□□□□□ -1.98
MSH1P25846 snR70snR70 164 nt2.68□□□□□ -1.98
MSH1P25846 RRF1YHR038W 693 nt2.68□□□□□ -1.98
MSH1P25846 SEC22YLR268W 645 nt2.68□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 36.9 ms