Protein–RNA interactions for Protein: P25383

TY2A-C, Transposon Ty2-C Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-CP25383 SNU114YKL173W 3027 nt2.55□□□□□ -2
TY2A-CP25383 MOT1YPL082C 5604 nt2.54□□□□□ -2
TY2A-CP25383 MMS1YPR164W 4224 nt2.54□□□□□ -2
TY2A-CP25383 YGL014C-AYGL014C-A 162 nt2.54□□□□□ -2
TY2A-CP25383 PNC1YGL037C 651 nt2.54□□□□□ -2
TY2A-CP25383 NFU1YKL040C 771 nt2.54□□□□□ -2
TY2A-CP25383 YLR031WYLR031W 561 nt2.54□□□□□ -2
TY2A-CP25383 PRE8YML092C 753 nt2.54□□□□□ -2
TY2A-CP25383 TOM1YDR457W 9807 nt2.54□□□□□ -2
TY2A-CP25383 DNA2YHR164C 4569 nt2.54□□□□□ -2
TY2A-CP25383 AMS1YGL156W 3252 nt2.54□□□□□ -2
TY2A-CP25383 SNX41YDR425W 1878 nt2.54□□□□□ -2
TY2A-CP25383 GIN4YDR507C 3429 nt2.54□□□□□ -2
TY2A-CP25383 VPS52YDR484W 1926 nt2.53□□□□□ -2
TY2A-CP25383 YER068C-AYER068C-A 432 nt2.53□□□□□ -2
TY2A-CP25383 YFR056CYFR056C 369 nt2.53□□□□□ -2
TY2A-CP25383 Q0142Q0142 177 nt2.53□□□□□ -2
TY2A-CP25383 YGR050CYGR050C 357 nt2.53□□□□□ -2
TY2A-CP25383 VOA1YGR106C 798 nt2.53□□□□□ -2
TY2A-CP25383 YHR138CYHR138C 345 nt2.53□□□□□ -2
TY2A-CP25383 AYR1YIL124W 894 nt2.53□□□□□ -2
TY2A-CP25383 PET191YJR034W 327 nt2.53□□□□□ -2
TY2A-CP25383 YOR392WYOR392W 444 nt2.53□□□□□ -2
TY2A-CP25383 RLI1YDR091C 1827 nt2.53□□□□□ -2
TY2A-CP25383 CDC20YGL116W 1833 nt2.53□□□□□ -2
TY2A-CP25383 PFF1YBR074W 2931 nt2.53□□□□□ -2
TY2A-CP25383 PTC5YOR090C 1719 nt2.53□□□□□ -2
TY2A-CP25383 UBP11YKR098C 2154 nt2.53□□□□□ -2
TY2A-CP25383 VPS16YPL045W 2397 nt2.52□□□□□ -2.01
TY2A-CP25383 HOS4YIL112W 3252 nt2.52□□□□□ -2.01
TY2A-CP25383 YDL041WYDL041W 354 nt2.52□□□□□ -2.01
TY2A-CP25383 SWF1YDR126W 1011 nt2.52□□□□□ -2.01
TY2A-CP25383 ACB1YGR037C 264 nt2.52□□□□□ -2.01
TY2A-CP25383 RPL14BYHL001W 417 nt2.52□□□□□ -2.01
TY2A-CP25383 YHL009W-AYHL009W-A 1242 nt2.52□□□□□ -2.01
TY2A-CP25383 COX7YMR256C 183 nt2.52□□□□□ -2.01
TY2A-CP25383 MRPL33YMR286W 261 nt2.52□□□□□ -2.01
TY2A-CP25383 YNL010WYNL010W 726 nt2.52□□□□□ -2.01
TY2A-CP25383 YOR053WYOR053W 342 nt2.52□□□□□ -2.01
TY2A-CP25383 YOR293C-AYOR293C-A 150 nt2.52□□□□□ -2.01
TY2A-CP25383 YPL261CYPL261C 309 nt2.52□□□□□ -2.01
TY2A-CP25383 INP53YOR109W 3324 nt2.52□□□□□ -2.01
TY2A-CP25383 INP51YIL002C 2841 nt2.51□□□□□ -2.01
TY2A-CP25383 NCL1YBL024W 2055 nt2.51□□□□□ -2.01
TY2A-CP25383 SAK1YER129W 3429 nt2.51□□□□□ -2.01
TY2A-CP25383 YDL025W-AYDL025W-A 105 nt2.51□□□□□ -2.01
TY2A-CP25383 MZM1YDR493W 372 nt2.51□□□□□ -2.01
TY2A-CP25383 YER076W-AYER076W-A 348 nt2.51□□□□□ -2.01
TY2A-CP25383 YHR139C-AYHR139C-A 312 nt2.51□□□□□ -2.01
TY2A-CP25383 ROX1YPR065W 1107 nt2.51□□□□□ -2.01
TY2A-CP25383 YBR285WYBR285W 435 nt2.51□□□□□ -2.01
TY2A-CP25383 REV1YOR346W 2958 nt2.51□□□□□ -2.01
TY2A-CP25383 YJL070CYJL070C 2667 nt2.51□□□□□ -2.01
TY2A-CP25383 ESL1YIL151C 3357 nt2.5□□□□□ -2.01
TY2A-CP25383 SEC7YDR170C 6030 nt2.5□□□□□ -2.01
TY2A-CP25383 RSE1YML049C 4086 nt2.5□□□□□ -2.01
TY2A-CP25383 SPC72YAL047C 1869 nt2.5□□□□□ -2.01
TY2A-CP25383 tR(ACG)Q2tR(ACG)Q2 74 nt2.5□□□□□ -2.01
TY2A-CP25383 YKL066WYKL066W 444 nt2.5□□□□□ -2.01
TY2A-CP25383 ATP3YBR039W 936 nt2.5□□□□□ -2.01
TY2A-CP25383 YIL080WYIL080W 4722 nt2.5□□□□□ -2.01
TY2A-CP25383 MSS11YMR164C 2277 nt2.49□□□□□ -2.01
TY2A-CP25383 IRC10YOL015W 1761 nt2.49□□□□□ -2.01
TY2A-CP25383 RRP12YPL012W 3687 nt2.49□□□□□ -2.01
TY2A-CP25383 FMP16YDR070C 282 nt2.49□□□□□ -2.01
TY2A-CP25383 YDR250CYDR250C 276 nt2.49□□□□□ -2.01
TY2A-CP25383 SDH7YDR511W 402 nt2.49□□□□□ -2.01
TY2A-CP25383 GIM4YEL003W 336 nt2.49□□□□□ -2.01
TY2A-CP25383 YHR086W-AYHR086W-A 162 nt2.49□□□□□ -2.01
TY2A-CP25383 LSM7YNL147W 348 nt2.49□□□□□ -2.01
TY2A-CP25383 PTP3YER075C 2787 nt2.49□□□□□ -2.01
TY2A-CP25383 HSC82YMR186W 2118 nt2.48□□□□□ -2.01
TY2A-CP25383 PRK1YIL095W 2433 nt2.48□□□□□ -2.01
TY2A-CP25383 MPH1YIR002C 2982 nt2.48□□□□□ -2.01
TY2A-CP25383 SDC1YDR469W 528 nt2.48□□□□□ -2.01
TY2A-CP25383 YAL068W-AYAL068W-A 255 nt2.48□□□□□ -2.01
TY2A-CP25383 RPS22BYLR367W 393 nt2.48□□□□□ -2.01
TY2A-CP25383 PDR1YGL013C 3207 nt2.48□□□□□ -2.01
TY2A-CP25383 MKT1YNL085W 2493 nt2.48□□□□□ -2.01
TY2A-CP25383 YNL018CYNL018C 1839 nt2.47□□□□□ -2.01
TY2A-CP25383 COX1Q0045 1605 nt2.47□□□□□ -2.01
TY2A-CP25383 YEL043WYEL043W 2871 nt2.47□□□□□ -2.01
TY2A-CP25383 SHE2YKL130C 741 nt2.47□□□□□ -2.01
TY2A-CP25383 YPL185WYPL185W 396 nt2.47□□□□□ -2.01
TY2A-CP25383 YBR277CYBR277C 402 nt2.47□□□□□ -2.01
TY2A-CP25383 IPT1YDR072C 1584 nt2.47□□□□□ -2.01
TY2A-CP25383 YDR186CYDR186C 2634 nt2.47□□□□□ -2.01
TY2A-CP25383 CBF2YGR140W 2871 nt2.47□□□□□ -2.01
TY2A-CP25383 NAN1YPL126W 2691 nt2.46□□□□□ -2.01
TY2A-CP25383 SMY2YBR172C 2223 nt2.46□□□□□ -2.01
TY2A-CP25383 MSL5YLR116W 1431 nt2.46□□□□□ -2.02
TY2A-CP25383 ESC1YMR219W 4977 nt2.46□□□□□ -2.02
TY2A-CP25383 snR79snR79 84 nt2.46□□□□□ -2.02
TY2A-CP25383 GRX8YLR364W 330 nt2.46□□□□□ -2.02
TY2A-CP25383 YOR050CYOR050C 348 nt2.46□□□□□ -2.02
TY2A-CP25383 YOR192C-CYOR192C-C 237 nt2.46□□□□□ -2.02
TY2A-CP25383 EGD1YPL037C 474 nt2.46□□□□□ -2.02
TY2A-CP25383 DAS1YJL149W 1992 nt2.46□□□□□ -2.02
TY2A-CP25383 SWA2YDR320C 2007 nt2.46□□□□□ -2.02
TY2A-CP25383 TOP2YNL088W 4287 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 57.5 ms