Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL8A2P25067 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL8A2P25067 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
COL8A2P25067 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.26■□□□□ 0.35
COL8A2P25067 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL8A2P25067 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL8A2P25067 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.26■□□□□ 0.35
COL8A2P25067 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL8A2P25067 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COL8A2P25067 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.26■□□□□ 0.35
COL8A2P25067 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COL8A2P25067 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.26■□□□□ 0.35
COL8A2P25067 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.26■□□□□ 0.35
COL8A2P25067 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.26■□□□□ 0.35
COL8A2P25067 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL8A2P25067 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.26■□□□□ 0.35
COL8A2P25067 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL8A2P25067 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.25■□□□□ 0.35
COL8A2P25067 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.25■□□□□ 0.35
COL8A2P25067 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.25■□□□□ 0.35
COL8A2P25067 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.25■□□□□ 0.35
COL8A2P25067 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.25■□□□□ 0.35
COL8A2P25067 ESRRAP1-201ENST00000400596 1257 ntBASIC17.25■□□□□ 0.35
COL8A2P25067 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.25■□□□□ 0.35
COL8A2P25067 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.25■□□□□ 0.35
COL8A2P25067 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
COL8A2P25067 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
COL8A2P25067 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.25■□□□□ 0.35
COL8A2P25067 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.25■□□□□ 0.35
COL8A2P25067 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.25■□□□□ 0.35
COL8A2P25067 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COL8A2P25067 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.25■□□□□ 0.35
COL8A2P25067 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL8A2P25067 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.25■□□□□ 0.35
COL8A2P25067 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.24■□□□□ 0.35
COL8A2P25067 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL8A2P25067 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.24■□□□□ 0.35
COL8A2P25067 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.24■□□□□ 0.35
COL8A2P25067 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.24■□□□□ 0.35
COL8A2P25067 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.24■□□□□ 0.35
COL8A2P25067 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 KRT18P29-201ENST00000397031 1267 ntBASIC17.24■□□□□ 0.35
COL8A2P25067 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
COL8A2P25067 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.24■□□□□ 0.35
COL8A2P25067 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.24■□□□□ 0.35
COL8A2P25067 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.24■□□□□ 0.35
COL8A2P25067 AC105020.6-201ENST00000621523 1217 ntBASIC17.24■□□□□ 0.35
COL8A2P25067 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.24■□□□□ 0.35
COL8A2P25067 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.24■□□□□ 0.35
COL8A2P25067 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL8A2P25067 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL8A2P25067 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL8A2P25067 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL8A2P25067 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL8A2P25067 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
COL8A2P25067 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
COL8A2P25067 AC011484.1-201ENST00000377652 1995 ntBASIC17.23■□□□□ 0.35
COL8A2P25067 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 UNC93B5-201ENST00000530315 699 ntBASIC17.23■□□□□ 0.35
COL8A2P25067 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.23■□□□□ 0.35
COL8A2P25067 ITM2C-210ENST00000620962 501 ntBASIC17.23■□□□□ 0.35
COL8A2P25067 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL8A2P25067 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
COL8A2P25067 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL8A2P25067 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL8A2P25067 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.22■□□□□ 0.35
COL8A2P25067 AC087633.2-202ENST00000565166 1439 ntBASIC17.22■□□□□ 0.35
COL8A2P25067 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
COL8A2P25067 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms