Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTLA4P16410 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CTLA4P16410 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.13■□□□□ 0.49
CTLA4P16410 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTLA4P16410 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CTLA4P16410 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.13■□□□□ 0.49
CTLA4P16410 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTLA4P16410 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTLA4P16410 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CTLA4P16410 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.12■□□□□ 0.49
CTLA4P16410 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTLA4P16410 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTLA4P16410 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CTLA4P16410 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CTLA4P16410 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTLA4P16410 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CTLA4P16410 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTLA4P16410 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CTLA4P16410 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.12■□□□□ 0.49
CTLA4P16410 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CTLA4P16410 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTLA4P16410 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.12■□□□□ 0.49
CTLA4P16410 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.12■□□□□ 0.49
CTLA4P16410 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CTLA4P16410 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CTLA4P16410 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTLA4P16410 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CTLA4P16410 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.12■□□□□ 0.49
CTLA4P16410 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTLA4P16410 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.11■□□□□ 0.49
CTLA4P16410 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.11■□□□□ 0.49
CTLA4P16410 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.11■□□□□ 0.49
CTLA4P16410 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.11■□□□□ 0.49
CTLA4P16410 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.11■□□□□ 0.49
CTLA4P16410 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.11■□□□□ 0.49
CTLA4P16410 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CTLA4P16410 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CTLA4P16410 AC112907.3-201ENST00000577781 2400 ntBASIC18.11■□□□□ 0.49
CTLA4P16410 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTLA4P16410 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTLA4P16410 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.1■□□□□ 0.49
CTLA4P16410 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CTLA4P16410 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.1■□□□□ 0.49
CTLA4P16410 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.1■□□□□ 0.49
CTLA4P16410 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.1■□□□□ 0.49
CTLA4P16410 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.1■□□□□ 0.49
CTLA4P16410 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTLA4P16410 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.1■□□□□ 0.49
CTLA4P16410 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.1■□□□□ 0.49
CTLA4P16410 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.1■□□□□ 0.49
CTLA4P16410 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTLA4P16410 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.1■□□□□ 0.49
CTLA4P16410 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.1■□□□□ 0.49
CTLA4P16410 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.09■□□□□ 0.49
CTLA4P16410 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.09■□□□□ 0.49
CTLA4P16410 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTLA4P16410 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTLA4P16410 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTLA4P16410 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTLA4P16410 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTLA4P16410 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.09■□□□□ 0.49
CTLA4P16410 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.09■□□□□ 0.49
CTLA4P16410 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CTLA4P16410 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.09■□□□□ 0.49
CTLA4P16410 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.09■□□□□ 0.49
CTLA4P16410 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTLA4P16410 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.09■□□□□ 0.49
CTLA4P16410 CDV3P1-201ENST00000471403 739 ntBASIC18.09■□□□□ 0.49
CTLA4P16410 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTLA4P16410 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.09■□□□□ 0.49
CTLA4P16410 AC010536.3-201ENST00000620306 533 ntBASIC18.09■□□□□ 0.49
CTLA4P16410 AC099778.1-201ENST00000568593 1911 ntBASIC18.09■□□□□ 0.49
CTLA4P16410 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTLA4P16410 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.09■□□□□ 0.49
CTLA4P16410 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.09■□□□□ 0.49
CTLA4P16410 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.09■□□□□ 0.49
CTLA4P16410 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTLA4P16410 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.09■□□□□ 0.49
CTLA4P16410 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTLA4P16410 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms