Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.25■□□□□ 0.67
NCK1P16333 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.25■□□□□ 0.67
NCK1P16333 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.25■□□□□ 0.67
NCK1P16333 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.25■□□□□ 0.67
NCK1P16333 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.25■□□□□ 0.67
NCK1P16333 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NCK1P16333 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCK1P16333 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.25■□□□□ 0.67
NCK1P16333 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NCK1P16333 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.24■□□□□ 0.67
NCK1P16333 AC098818.2-201ENST00000564925 2320 ntBASIC19.24■□□□□ 0.67
NCK1P16333 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NCK1P16333 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NCK1P16333 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 UNC93B3-201ENST00000308076 687 ntBASIC19.24■□□□□ 0.67
NCK1P16333 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NCK1P16333 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.24■□□□□ 0.67
NCK1P16333 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.24■□□□□ 0.67
NCK1P16333 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.24■□□□□ 0.67
NCK1P16333 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.24■□□□□ 0.67
NCK1P16333 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
NCK1P16333 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.24■□□□□ 0.67
NCK1P16333 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCK1P16333 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NCK1P16333 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.23■□□□□ 0.67
NCK1P16333 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.23■□□□□ 0.67
NCK1P16333 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.23■□□□□ 0.67
NCK1P16333 EEF1DP3-203ENST00000566025 782 ntBASIC19.23■□□□□ 0.67
NCK1P16333 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.23■□□□□ 0.67
NCK1P16333 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCK1P16333 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCK1P16333 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.22■□□□□ 0.67
NCK1P16333 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.22■□□□□ 0.67
NCK1P16333 AC018445.3-201ENST00000624177 1945 ntBASIC19.22■□□□□ 0.67
NCK1P16333 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.22■□□□□ 0.67
NCK1P16333 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCK1P16333 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCK1P16333 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCK1P16333 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.22■□□□□ 0.67
NCK1P16333 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.22■□□□□ 0.67
NCK1P16333 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.22■□□□□ 0.67
NCK1P16333 AC024257.2-201ENST00000549699 147 ntBASIC19.22■□□□□ 0.67
NCK1P16333 AC053503.5-201ENST00000601508 636 ntBASIC19.22■□□□□ 0.67
NCK1P16333 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCK1P16333 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCK1P16333 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCK1P16333 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCK1P16333 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NCK1P16333 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NCK1P16333 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.21■□□□□ 0.67
NCK1P16333 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.21■□□□□ 0.67
NCK1P16333 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.21■□□□□ 0.67
NCK1P16333 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NCK1P16333 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCK1P16333 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NCK1P16333 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.21■□□□□ 0.67
NCK1P16333 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 AL136116.3-201ENST00000402907 1138 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms