Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CD48P09326 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CD48P09326 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.19■□□□□ 0.98
CD48P09326 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.19■□□□□ 0.98
CD48P09326 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CD48P09326 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD48P09326 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
CD48P09326 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
CD48P09326 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD48P09326 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.18■□□□□ 0.98
CD48P09326 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CD48P09326 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CD48P09326 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD48P09326 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.18■□□□□ 0.98
CD48P09326 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CD48P09326 CNN2P6-201ENST00000439038 900 ntBASIC21.18■□□□□ 0.98
CD48P09326 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.18■□□□□ 0.98
CD48P09326 DUX4L16-201ENST00000555130 1264 ntBASIC21.18■□□□□ 0.98
CD48P09326 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CD48P09326 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD48P09326 AC016405.3-201ENST00000607710 860 ntBASIC21.18■□□□□ 0.98
CD48P09326 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CD48P09326 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD48P09326 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD48P09326 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD48P09326 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CD48P09326 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.17■□□□□ 0.98
CD48P09326 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CD48P09326 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.17■□□□□ 0.98
CD48P09326 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 CDV3P1-201ENST00000471403 739 ntBASIC21.17■□□□□ 0.98
CD48P09326 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.17■□□□□ 0.98
CD48P09326 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
CD48P09326 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.17■□□□□ 0.98
CD48P09326 AC092720.2-201ENST00000602388 1665 ntBASIC21.17■□□□□ 0.98
CD48P09326 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
CD48P09326 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.17■□□□□ 0.98
CD48P09326 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CD48P09326 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.17■□□□□ 0.98
CD48P09326 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD48P09326 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
CD48P09326 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CD48P09326 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD48P09326 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD48P09326 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.16■□□□□ 0.98
CD48P09326 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD48P09326 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD48P09326 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD48P09326 AC022517.1-201ENST00000592429 346 ntBASIC21.16■□□□□ 0.98
CD48P09326 AL591742.1-201ENST00000604433 565 ntBASIC21.16■□□□□ 0.98
CD48P09326 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD48P09326 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.16■□□□□ 0.98
CD48P09326 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.16■□□□□ 0.98
CD48P09326 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CD48P09326 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CD48P09326 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.15■□□□□ 0.98
CD48P09326 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.15■□□□□ 0.98
CD48P09326 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.15■□□□□ 0.98
CD48P09326 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.15■□□□□ 0.98
CD48P09326 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 MIR935-201ENST00000401179 91 ntBASIC21.15■□□□□ 0.98
CD48P09326 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.15■□□□□ 0.98
CD48P09326 AC013268.1-206ENST00000638368 961 ntBASIC21.15■□□□□ 0.98
CD48P09326 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.15■□□□□ 0.98
CD48P09326 AC112229.1-201ENST00000639295 961 ntBASIC21.15■□□□□ 0.98
CD48P09326 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CD48P09326 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CD48P09326 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD48P09326 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD48P09326 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CD48P09326 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD48P09326 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.14■□□□□ 0.97
CD48P09326 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD48P09326 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CD48P09326 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD48P09326 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.14■□□□□ 0.97
CD48P09326 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.14■□□□□ 0.97
CD48P09326 AC007322.4-201ENST00000509611 723 ntBASIC21.14■□□□□ 0.97
CD48P09326 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.14■□□□□ 0.97
CD48P09326 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD48P09326 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms