Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.8■□□□□ 0.6
THBS1P07996 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THBS1P07996 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THBS1P07996 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS1P07996 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THBS1P07996 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
THBS1P07996 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
THBS1P07996 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS1P07996 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
THBS1P07996 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.79■□□□□ 0.6
THBS1P07996 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS1P07996 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.79■□□□□ 0.6
THBS1P07996 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.79■□□□□ 0.6
THBS1P07996 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.79■□□□□ 0.6
THBS1P07996 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS1P07996 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
THBS1P07996 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS1P07996 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS1P07996 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
THBS1P07996 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.78■□□□□ 0.6
THBS1P07996 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS1P07996 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS1P07996 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.78■□□□□ 0.6
THBS1P07996 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.78■□□□□ 0.6
THBS1P07996 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS1P07996 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.78■□□□□ 0.6
THBS1P07996 KRT8P36-201ENST00000489121 1440 ntBASIC18.78■□□□□ 0.6
THBS1P07996 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
THBS1P07996 KRT18P11-201ENST00000435214 1283 ntBASIC18.78■□□□□ 0.6
THBS1P07996 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.78■□□□□ 0.6
THBS1P07996 AC010536.3-201ENST00000620306 533 ntBASIC18.78■□□□□ 0.6
THBS1P07996 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.78■□□□□ 0.6
THBS1P07996 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
THBS1P07996 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS1P07996 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS1P07996 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
THBS1P07996 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.78■□□□□ 0.6
THBS1P07996 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.78■□□□□ 0.6
THBS1P07996 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS1P07996 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS1P07996 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
THBS1P07996 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.78■□□□□ 0.6
THBS1P07996 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.77■□□□□ 0.6
THBS1P07996 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
THBS1P07996 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.77■□□□□ 0.6
THBS1P07996 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.77■□□□□ 0.6
THBS1P07996 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.77■□□□□ 0.6
THBS1P07996 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
THBS1P07996 TERF1P5-201ENST00000477545 1207 ntBASIC18.77■□□□□ 0.6
THBS1P07996 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
THBS1P07996 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
THBS1P07996 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.77■□□□□ 0.6
THBS1P07996 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.77■□□□□ 0.6
THBS1P07996 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
THBS1P07996 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.77■□□□□ 0.6
THBS1P07996 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
THBS1P07996 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS1P07996 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
THBS1P07996 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
THBS1P07996 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.77■□□□□ 0.59
THBS1P07996 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
THBS1P07996 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.76■□□□□ 0.59
THBS1P07996 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.76■□□□□ 0.59
THBS1P07996 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
THBS1P07996 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.76■□□□□ 0.59
THBS1P07996 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.76■□□□□ 0.59
THBS1P07996 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.76■□□□□ 0.59
THBS1P07996 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.76■□□□□ 0.59
THBS1P07996 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
THBS1P07996 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS1P07996 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.76■□□□□ 0.59
THBS1P07996 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms