Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC1P07992 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC1P07992 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.05■□□□□ 0.48
ERCC1P07992 AC053503.5-201ENST00000601508 636 ntBASIC18.05■□□□□ 0.48
ERCC1P07992 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
ERCC1P07992 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC1P07992 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
ERCC1P07992 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC1P07992 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC1P07992 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC1P07992 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC1P07992 CDCA4P2-201ENST00000441182 718 ntBASIC18.04■□□□□ 0.48
ERCC1P07992 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
ERCC1P07992 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.04■□□□□ 0.48
ERCC1P07992 UBE2DNL-204ENST00000602536 740 ntBASIC18.04■□□□□ 0.48
ERCC1P07992 MYCNOS-205ENST00000641950 531 ntBASIC18.04■□□□□ 0.48
ERCC1P07992 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC1P07992 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC1P07992 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC1P07992 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC1P07992 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ERCC1P07992 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ERCC1P07992 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ERCC1P07992 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.03■□□□□ 0.48
ERCC1P07992 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.03■□□□□ 0.48
ERCC1P07992 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.03■□□□□ 0.48
ERCC1P07992 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC1P07992 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ERCC1P07992 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 AC121338.2-201ENST00000622535 1744 ntBASIC18.03■□□□□ 0.48
ERCC1P07992 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ERCC1P07992 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
ERCC1P07992 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC1P07992 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC1P07992 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
ERCC1P07992 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC1P07992 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC1P07992 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC1P07992 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC1P07992 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC1P07992 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC1P07992 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC1P07992 AC007322.1-201ENST00000426983 750 ntBASIC18.02■□□□□ 0.48
ERCC1P07992 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.02■□□□□ 0.48
ERCC1P07992 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.02■□□□□ 0.48
ERCC1P07992 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC1P07992 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.02■□□□□ 0.48
ERCC1P07992 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.02■□□□□ 0.48
ERCC1P07992 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
ERCC1P07992 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC1P07992 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC1P07992 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ERCC1P07992 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC1P07992 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
ERCC1P07992 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ERCC1P07992 AP005212.1-201ENST00000581547 1997 ntBASIC18.01■□□□□ 0.47
ERCC1P07992 PLK5-205ENST00000642079 1969 ntBASIC18.01■□□□□ 0.47
ERCC1P07992 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC1P07992 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC1P07992 EEF1DP3-203ENST00000566025 782 ntBASIC18.01■□□□□ 0.47
ERCC1P07992 MFSD11-216ENST00000590393 1141 ntBASIC18.01■□□□□ 0.47
ERCC1P07992 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC1P07992 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ERCC1P07992 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC1P07992 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC1P07992 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC1P07992 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC1P07992 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18■□□□□ 0.47
ERCC1P07992 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18■□□□□ 0.47
ERCC1P07992 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 POU5F1P4-201ENST00000413175 1085 ntBASIC18■□□□□ 0.47
ERCC1P07992 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18■□□□□ 0.47
ERCC1P07992 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
ERCC1P07992 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18■□□□□ 0.47
ERCC1P07992 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms