Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.47■■□□□ 1.51
APPP05067 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.47■■□□□ 1.51
APPP05067 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.47■■□□□ 1.51
APPP05067 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.47■■□□□ 1.51
APPP05067 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.47■■□□□ 1.51
APPP05067 AC133041.1-202ENST00000642053 222 ntBASIC24.47■■□□□ 1.51
APPP05067 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 AC027702.1-201ENST00000563810 1770 ntBASIC24.47■■□□□ 1.51
APPP05067 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.46■■□□□ 1.51
APPP05067 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.46■■□□□ 1.51
APPP05067 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.46■■□□□ 1.51
APPP05067 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
APPP05067 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.46■■□□□ 1.51
APPP05067 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
APPP05067 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
APPP05067 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
APPP05067 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
APPP05067 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
APPP05067 AC069152.1-201ENST00000438030 544 ntBASIC24.46■■□□□ 1.51
APPP05067 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.46■■□□□ 1.51
APPP05067 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.46■■□□□ 1.51
APPP05067 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.46■■□□□ 1.51
APPP05067 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
APPP05067 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.46■■□□□ 1.51
APPP05067 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.46■■□□□ 1.51
APPP05067 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
APPP05067 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
APPP05067 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.46■■□□□ 1.51
APPP05067 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
APPP05067 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
APPP05067 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
APPP05067 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.45■■□□□ 1.51
APPP05067 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
APPP05067 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.45■■□□□ 1.51
APPP05067 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
APPP05067 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.45■■□□□ 1.5
APPP05067 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
APPP05067 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
APPP05067 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.45■■□□□ 1.5
APPP05067 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.45■■□□□ 1.5
APPP05067 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.45■■□□□ 1.5
APPP05067 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.45■■□□□ 1.5
APPP05067 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.45■■□□□ 1.5
APPP05067 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
APPP05067 AC092118.2-201ENST00000613495 667 ntBASIC24.45■■□□□ 1.5
APPP05067 AL589743.5-201ENST00000616611 1050 ntBASIC24.45■■□□□ 1.5
APPP05067 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.45■■□□□ 1.5
APPP05067 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
APPP05067 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
APPP05067 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
APPP05067 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.45■■□□□ 1.5
APPP05067 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.44■■□□□ 1.5
APPP05067 AC006128.1-201ENST00000624704 1661 ntBASIC24.44■■□□□ 1.5
APPP05067 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
APPP05067 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.44■■□□□ 1.5
APPP05067 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.44■■□□□ 1.5
APPP05067 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.44■■□□□ 1.5
APPP05067 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.44■■□□□ 1.5
APPP05067 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
APPP05067 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
APPP05067 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
APPP05067 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.44■■□□□ 1.5
APPP05067 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
APPP05067 AC087633.2-202ENST00000565166 1439 ntBASIC24.44■■□□□ 1.5
APPP05067 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
APPP05067 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.43■■□□□ 1.5
APPP05067 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
APPP05067 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
APPP05067 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.43■■□□□ 1.5
APPP05067 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.43■■□□□ 1.5
APPP05067 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.43■■□□□ 1.5
APPP05067 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
APPP05067 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.43■■□□□ 1.5
APPP05067 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
APPP05067 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
APPP05067 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
APPP05067 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.43■■□□□ 1.5
APPP05067 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
APPP05067 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
APPP05067 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
APPP05067 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
APPP05067 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.42■■□□□ 1.5
APPP05067 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
APPP05067 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
APPP05067 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.42■■□□□ 1.5
APPP05067 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
APPP05067 PGM5P4-201ENST00000421970 445 ntBASIC24.42■■□□□ 1.5
APPP05067 DUSP5P2-201ENST00000426873 1033 ntBASIC24.42■■□□□ 1.5
APPP05067 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
APPP05067 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.42■■□□□ 1.5
APPP05067 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
APPP05067 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
APPP05067 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
APPP05067 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
APPP05067 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms