Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.89□□□□□ -0.35
APOBP04114 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBP04114 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC12.89□□□□□ -0.35
APOBP04114 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBP04114 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.89□□□□□ -0.35
APOBP04114 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBP04114 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBP04114 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
APOBP04114 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBP04114 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBP04114 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBP04114 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
APOBP04114 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
APOBP04114 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
APOBP04114 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.89□□□□□ -0.35
APOBP04114 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBP04114 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC12.88□□□□□ -0.35
APOBP04114 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 INGX-201ENST00000359239 846 ntBASIC12.88□□□□□ -0.35
APOBP04114 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.88□□□□□ -0.35
APOBP04114 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.88□□□□□ -0.35
APOBP04114 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.88□□□□□ -0.35
APOBP04114 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.88□□□□□ -0.35
APOBP04114 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.88□□□□□ -0.35
APOBP04114 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APOBP04114 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
APOBP04114 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APOBP04114 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
APOBP04114 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.88□□□□□ -0.35
APOBP04114 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC12.88□□□□□ -0.35
APOBP04114 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 AC009947.2-201ENST00000444014 672 ntBASIC12.88□□□□□ -0.35
APOBP04114 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOBP04114 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.87□□□□□ -0.35
APOBP04114 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBP04114 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOBP04114 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.87□□□□□ -0.35
APOBP04114 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
APOBP04114 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOBP04114 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.87□□□□□ -0.35
APOBP04114 UNC93B2-201ENST00000285383 730 ntBASIC12.87□□□□□ -0.35
APOBP04114 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBP04114 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.87□□□□□ -0.35
APOBP04114 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.87□□□□□ -0.35
APOBP04114 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
APOBP04114 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOBP04114 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.87□□□□□ -0.35
APOBP04114 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOBP04114 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBP04114 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBP04114 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBP04114 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBP04114 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBP04114 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBP04114 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBP04114 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBP04114 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBP04114 MYC-208ENST00000641036 567 ntBASIC12.86□□□□□ -0.35
APOBP04114 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBP04114 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC12.86□□□□□ -0.35
APOBP04114 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOBP04114 AC026396.1-201ENST00000419388 421 ntBASIC12.86□□□□□ -0.35
APOBP04114 AL031963.3-201ENST00000606441 850 ntBASIC12.86□□□□□ -0.35
APOBP04114 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
APOBP04114 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.86□□□□□ -0.35
APOBP04114 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
APOBP04114 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBP04114 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBP04114 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
APOBP04114 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
APOBP04114 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
APOBP04114 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.86□□□□□ -0.35
APOBP04114 AL353807.1-201ENST00000427475 662 ntBASIC12.86□□□□□ -0.35
APOBP04114 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.86□□□□□ -0.35
APOBP04114 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBP04114 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
APOBP04114 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms