Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.36■■□□□ 1.01
APOEP02649 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.36■■□□□ 1.01
APOEP02649 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.36■■□□□ 1.01
APOEP02649 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APOEP02649 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.36■■□□□ 1.01
APOEP02649 AC010980.2-201ENST00000587099 1412 ntBASIC21.36■■□□□ 1.01
APOEP02649 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
APOEP02649 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
APOEP02649 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
APOEP02649 AC011484.1-201ENST00000377652 1995 ntBASIC21.36■■□□□ 1.01
APOEP02649 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APOEP02649 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
APOEP02649 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
APOEP02649 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
APOEP02649 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APOEP02649 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
APOEP02649 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
APOEP02649 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
APOEP02649 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.35■■□□□ 1.01
APOEP02649 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.35■■□□□ 1.01
APOEP02649 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APOEP02649 AC100791.3-201ENST00000617619 330 ntBASIC21.35■■□□□ 1.01
APOEP02649 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.35■■□□□ 1.01
APOEP02649 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APOEP02649 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
APOEP02649 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.35■■□□□ 1.01
APOEP02649 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
APOEP02649 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
APOEP02649 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.34■■□□□ 1.01
APOEP02649 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.34■■□□□ 1.01
APOEP02649 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APOEP02649 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.34■■□□□ 1.01
APOEP02649 GUSBP6-202ENST00000438529 1198 ntBASIC21.34■■□□□ 1.01
APOEP02649 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.34■■□□□ 1.01
APOEP02649 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APOEP02649 AL157384.1-201ENST00000445995 2473 ntBASIC21.34■■□□□ 1.01
APOEP02649 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APOEP02649 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APOEP02649 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APOEP02649 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APOEP02649 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
APOEP02649 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
APOEP02649 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
APOEP02649 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.33■■□□□ 1.01
APOEP02649 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
APOEP02649 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APOEP02649 AL355802.2-201ENST00000402069 882 ntBASIC21.33■■□□□ 1.01
APOEP02649 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.33■■□□□ 1.01
APOEP02649 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.33■■□□□ 1.01
APOEP02649 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
APOEP02649 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APOEP02649 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
APOEP02649 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
APOEP02649 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
APOEP02649 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 AC121338.2-201ENST00000622535 1744 ntBASIC21.32■■□□□ 1
APOEP02649 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.32■■□□□ 1
APOEP02649 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.32■■□□□ 1
APOEP02649 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 MCRIP2P1-201ENST00000394346 511 ntBASIC21.32■■□□□ 1
APOEP02649 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.32■■□□□ 1
APOEP02649 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.32■■□□□ 1
APOEP02649 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.32■■□□□ 1
APOEP02649 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 AC073130.3-201ENST00000624389 2278 ntBASIC21.32■■□□□ 1
APOEP02649 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APOEP02649 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.31■■□□□ 1
APOEP02649 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.31■■□□□ 1
APOEP02649 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.31■■□□□ 1
APOEP02649 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.31■■□□□ 1
APOEP02649 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
APOEP02649 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
APOEP02649 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.31■■□□□ 1
APOEP02649 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
APOEP02649 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.31■■□□□ 1
APOEP02649 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.31■■□□□ 1
APOEP02649 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.31■■□□□ 1
APOEP02649 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.31■■□□□ 1
APOEP02649 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APOEP02649 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APOEP02649 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
APOEP02649 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.3■■□□□ 1
APOEP02649 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.3■■□□□ 1
APOEP02649 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms