Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TIMP1P01033 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
TIMP1P01033 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TIMP1P01033 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.3■■□□□ 1.16
TIMP1P01033 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.29■■□□□ 1.16
TIMP1P01033 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TIMP1P01033 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.29■■□□□ 1.16
TIMP1P01033 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
TIMP1P01033 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.29■■□□□ 1.16
TIMP1P01033 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.29■■□□□ 1.16
TIMP1P01033 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.29■■□□□ 1.16
TIMP1P01033 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TIMP1P01033 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.29■■□□□ 1.16
TIMP1P01033 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TIMP1P01033 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TIMP1P01033 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TIMP1P01033 KRT8P9-201ENST00000558927 1449 ntBASIC22.29■■□□□ 1.16
TIMP1P01033 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.29■■□□□ 1.16
TIMP1P01033 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TIMP1P01033 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
TIMP1P01033 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TIMP1P01033 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
TIMP1P01033 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TIMP1P01033 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 NBPF21P-201ENST00000425093 1451 ntBASIC22.28■■□□□ 1.16
TIMP1P01033 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 AC079598.2-202ENST00000546624 1451 ntBASIC22.28■■□□□ 1.16
TIMP1P01033 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TIMP1P01033 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.28■■□□□ 1.16
TIMP1P01033 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TIMP1P01033 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.28■■□□□ 1.16
TIMP1P01033 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.28■■□□□ 1.16
TIMP1P01033 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.28■■□□□ 1.16
TIMP1P01033 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TIMP1P01033 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
TIMP1P01033 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TIMP1P01033 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP1P01033 UNC93B2-201ENST00000285383 730 ntBASIC22.27■■□□□ 1.16
TIMP1P01033 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP1P01033 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP1P01033 AC113347.1-201ENST00000413321 391 ntBASIC22.27■■□□□ 1.16
TIMP1P01033 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.27■■□□□ 1.16
TIMP1P01033 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.27■■□□□ 1.16
TIMP1P01033 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.27■■□□□ 1.16
TIMP1P01033 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.27■■□□□ 1.16
TIMP1P01033 NUDT16P1-203ENST00000513809 620 ntBASIC22.27■■□□□ 1.16
TIMP1P01033 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.27■■□□□ 1.16
TIMP1P01033 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
TIMP1P01033 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP1P01033 AC127496.7-201ENST00000625110 1798 ntBASIC22.27■■□□□ 1.16
TIMP1P01033 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP1P01033 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TIMP1P01033 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TIMP1P01033 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP1P01033 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.26■■□□□ 1.15
TIMP1P01033 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TIMP1P01033 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
TIMP1P01033 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP1P01033 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP1P01033 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP1P01033 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.26■■□□□ 1.15
TIMP1P01033 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP1P01033 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.26■■□□□ 1.15
TIMP1P01033 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.26■■□□□ 1.15
TIMP1P01033 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TIMP1P01033 AP000525.1-201ENST00000608286 694 ntBASIC22.26■■□□□ 1.15
TIMP1P01033 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.26■■□□□ 1.15
TIMP1P01033 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.26■■□□□ 1.15
TIMP1P01033 LINC01568-207ENST00000641790 1380 ntBASIC22.25■■□□□ 1.15
TIMP1P01033 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.25■■□□□ 1.15
TIMP1P01033 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP1P01033 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.25■■□□□ 1.15
TIMP1P01033 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.25■■□□□ 1.15
TIMP1P01033 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.25■■□□□ 1.15
TIMP1P01033 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.25■■□□□ 1.15
TIMP1P01033 REXO1L10P-201ENST00000615707 1290 ntBASIC22.25■■□□□ 1.15
TIMP1P01033 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.25■■□□□ 1.15
TIMP1P01033 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TIMP1P01033 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.25■■□□□ 1.15
TIMP1P01033 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP1P01033 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.25■■□□□ 1.15
TIMP1P01033 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP1P01033 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
TIMP1P01033 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.24■■□□□ 1.15
TIMP1P01033 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP1P01033 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP1P01033 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP1P01033 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP1P01033 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.24■■□□□ 1.15
TIMP1P01033 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.24■■□□□ 1.15
TIMP1P01033 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.24■■□□□ 1.15
TIMP1P01033 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms