Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SCAF4O95104 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.65■□□□□ 0.26
SCAF4O95104 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.65■□□□□ 0.26
SCAF4O95104 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.65■□□□□ 0.26
SCAF4O95104 AC142381.2-201ENST00000566120 298 ntBASIC16.65■□□□□ 0.26
SCAF4O95104 AC008764.7-201ENST00000593779 1081 ntBASIC16.65■□□□□ 0.26
SCAF4O95104 AC005837.3-201ENST00000612163 286 ntBASIC16.65■□□□□ 0.26
SCAF4O95104 AL355001.2-201ENST00000620617 1191 ntBASIC16.65■□□□□ 0.26
SCAF4O95104 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.65■□□□□ 0.26
SCAF4O95104 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCAF4O95104 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.65■□□□□ 0.26
SCAF4O95104 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SCAF4O95104 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SCAF4O95104 BX323043.1-201ENST00000641006 1765 ntBASIC16.64■□□□□ 0.25
SCAF4O95104 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.64■□□□□ 0.25
SCAF4O95104 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SCAF4O95104 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 EDA-201ENST00000338901 1233 ntBASIC16.64■□□□□ 0.25
SCAF4O95104 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.64■□□□□ 0.25
SCAF4O95104 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.64■□□□□ 0.25
SCAF4O95104 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.64■□□□□ 0.25
SCAF4O95104 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
SCAF4O95104 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SCAF4O95104 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.64■□□□□ 0.25
SCAF4O95104 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.64■□□□□ 0.25
SCAF4O95104 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 PLK5-205ENST00000642079 1969 ntBASIC16.64■□□□□ 0.25
SCAF4O95104 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
SCAF4O95104 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCAF4O95104 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SCAF4O95104 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCAF4O95104 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCAF4O95104 AC007225.1-201ENST00000566331 1836 ntBASIC16.63■□□□□ 0.25
SCAF4O95104 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.63■□□□□ 0.25
SCAF4O95104 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCAF4O95104 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.63■□□□□ 0.25
SCAF4O95104 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCAF4O95104 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.63■□□□□ 0.25
SCAF4O95104 AP005435.1-201ENST00000529293 1178 ntBASIC16.63■□□□□ 0.25
SCAF4O95104 AF213884.3-201ENST00000563833 479 ntBASIC16.63■□□□□ 0.25
SCAF4O95104 AC133561.4-201ENST00000566112 224 ntBASIC16.63■□□□□ 0.25
SCAF4O95104 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.63■□□□□ 0.25
SCAF4O95104 AC010525.1-201ENST00000585559 441 ntBASIC16.63■□□□□ 0.25
SCAF4O95104 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.63■□□□□ 0.25
SCAF4O95104 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SCAF4O95104 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.62■□□□□ 0.25
SCAF4O95104 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCAF4O95104 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.62■□□□□ 0.25
SCAF4O95104 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCAF4O95104 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCAF4O95104 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCAF4O95104 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCAF4O95104 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.62■□□□□ 0.25
SCAF4O95104 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.62■□□□□ 0.25
SCAF4O95104 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SCAF4O95104 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCAF4O95104 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCAF4O95104 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCAF4O95104 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SCAF4O95104 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.62■□□□□ 0.25
SCAF4O95104 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCAF4O95104 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCAF4O95104 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAF4O95104 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCAF4O95104 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.61■□□□□ 0.25
SCAF4O95104 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAF4O95104 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SCAF4O95104 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SCAF4O95104 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAF4O95104 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAF4O95104 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAF4O95104 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.61■□□□□ 0.25
SCAF4O95104 SLC47A1P1-202ENST00000449666 945 ntBASIC16.61■□□□□ 0.25
SCAF4O95104 AP001330.3-201ENST00000520123 633 ntBASIC16.61■□□□□ 0.25
SCAF4O95104 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAF4O95104 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.61■□□□□ 0.25
SCAF4O95104 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCAF4O95104 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SCAF4O95104 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAF4O95104 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms