Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 PTBP1P-201ENST00000554374 1601 ntBASIC19.59■□□□□ 0.73
SNRNP200O75643 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.59■□□□□ 0.73
SNRNP200O75643 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNRNP200O75643 ABHD17AP1-201ENST00000358206 933 ntBASIC19.59■□□□□ 0.73
SNRNP200O75643 PGM5P4-201ENST00000421970 445 ntBASIC19.59■□□□□ 0.73
SNRNP200O75643 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.59■□□□□ 0.73
SNRNP200O75643 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.59■□□□□ 0.73
SNRNP200O75643 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.59■□□□□ 0.73
SNRNP200O75643 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 FP700111.2-201ENST00000619190 1892 ntBASIC19.59■□□□□ 0.73
SNRNP200O75643 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRNP200O75643 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.58■□□□□ 0.73
SNRNP200O75643 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNRNP200O75643 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNRNP200O75643 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNRNP200O75643 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNRNP200O75643 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.58■□□□□ 0.73
SNRNP200O75643 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.58■□□□□ 0.73
SNRNP200O75643 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNRNP200O75643 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SNRNP200O75643 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.58■□□□□ 0.73
SNRNP200O75643 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.58■□□□□ 0.73
SNRNP200O75643 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNRNP200O75643 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.58■□□□□ 0.73
SNRNP200O75643 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNRNP200O75643 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRNP200O75643 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRNP200O75643 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRNP200O75643 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRNP200O75643 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.58■□□□□ 0.72
SNRNP200O75643 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRNP200O75643 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRNP200O75643 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRNP200O75643 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRNP200O75643 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRNP200O75643 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRNP200O75643 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRNP200O75643 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRNP200O75643 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.57■□□□□ 0.72
SNRNP200O75643 KRT18P68-201ENST00000392293 1000 ntBASIC19.57■□□□□ 0.72
SNRNP200O75643 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRNP200O75643 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SNRNP200O75643 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRNP200O75643 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRNP200O75643 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SNRNP200O75643 KRT8P36-201ENST00000489121 1440 ntBASIC19.57■□□□□ 0.72
SNRNP200O75643 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRNP200O75643 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNRNP200O75643 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRNP200O75643 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.57■□□□□ 0.72
SNRNP200O75643 AC133041.1-202ENST00000642053 222 ntBASIC19.57■□□□□ 0.72
SNRNP200O75643 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNRNP200O75643 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.56■□□□□ 0.72
SNRNP200O75643 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SNRNP200O75643 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.56■□□□□ 0.72
SNRNP200O75643 AC073314.1-201ENST00000568729 2216 ntBASIC19.56■□□□□ 0.72
SNRNP200O75643 AC027702.1-201ENST00000563810 1770 ntBASIC19.56■□□□□ 0.72
SNRNP200O75643 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRNP200O75643 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SNRNP200O75643 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SNRNP200O75643 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.55■□□□□ 0.72
SNRNP200O75643 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SNRNP200O75643 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SNRNP200O75643 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 AL157384.1-201ENST00000445995 2473 ntBASIC19.55■□□□□ 0.72
SNRNP200O75643 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SNRNP200O75643 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.55■□□□□ 0.72
SNRNP200O75643 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.55■□□□□ 0.72
SNRNP200O75643 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.55■□□□□ 0.72
SNRNP200O75643 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.55■□□□□ 0.72
SNRNP200O75643 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNRNP200O75643 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms