Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM3O75382 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM3O75382 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRIM3O75382 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM3O75382 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM3O75382 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TRIM3O75382 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM3O75382 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM3O75382 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM3O75382 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM3O75382 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM3O75382 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM3O75382 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM3O75382 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM3O75382 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM3O75382 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM3O75382 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM3O75382 AC091799.1-201ENST00000422823 811 ntBASIC18.97■□□□□ 0.63
TRIM3O75382 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM3O75382 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM3O75382 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM3O75382 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM3O75382 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM3O75382 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM3O75382 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM3O75382 FEM1AP4-201ENST00000443167 1987 ntBASIC18.97■□□□□ 0.63
TRIM3O75382 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM3O75382 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM3O75382 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM3O75382 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM3O75382 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM3O75382 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
TRIM3O75382 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 GUSBP6-202ENST00000438529 1198 ntBASIC18.96■□□□□ 0.63
TRIM3O75382 TSPY6P-201ENST00000448518 926 ntBASIC18.96■□□□□ 0.63
TRIM3O75382 AF201337.1-201ENST00000520239 748 ntBASIC18.96■□□□□ 0.63
TRIM3O75382 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM3O75382 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRIM3O75382 OR10C1-204ENST00000622521 1039 ntBASIC18.96■□□□□ 0.63
TRIM3O75382 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM3O75382 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM3O75382 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRIM3O75382 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRIM3O75382 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 AC105036.2-201ENST00000569468 176 ntBASIC18.95■□□□□ 0.62
TRIM3O75382 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM3O75382 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRIM3O75382 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM3O75382 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRIM3O75382 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRIM3O75382 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM3O75382 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRIM3O75382 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRIM3O75382 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM3O75382 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRIM3O75382 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM3O75382 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM3O75382 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TRIM3O75382 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRIM3O75382 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM3O75382 AC069236.1-201ENST00000604339 616 ntBASIC18.94■□□□□ 0.62
TRIM3O75382 AC008694.1-202ENST00000636953 945 ntBASIC18.94■□□□□ 0.62
TRIM3O75382 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM3O75382 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM3O75382 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM3O75382 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM3O75382 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM3O75382 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms