Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 LSM12P1-201ENST00000411836 588 ntBASIC19.16■□□□□ 0.66
CTNSO60931 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.16■□□□□ 0.66
CTNSO60931 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.16■□□□□ 0.66
CTNSO60931 AL589743.5-201ENST00000616611 1050 ntBASIC19.16■□□□□ 0.66
CTNSO60931 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.16■□□□□ 0.66
CTNSO60931 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTNSO60931 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CTNSO60931 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTNSO60931 KRT8P36-201ENST00000489121 1440 ntBASIC19.16■□□□□ 0.66
CTNSO60931 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNSO60931 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNSO60931 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CTNSO60931 FP700111.2-201ENST00000619190 1892 ntBASIC19.16■□□□□ 0.66
CTNSO60931 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.15■□□□□ 0.66
CTNSO60931 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.15■□□□□ 0.66
CTNSO60931 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.15■□□□□ 0.66
CTNSO60931 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNSO60931 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.15■□□□□ 0.66
CTNSO60931 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTNSO60931 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTNSO60931 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CTNSO60931 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNSO60931 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTNSO60931 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNSO60931 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNSO60931 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTNSO60931 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CTNSO60931 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNSO60931 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTNSO60931 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNSO60931 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNSO60931 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNSO60931 MIR4758-201ENST00000577688 71 ntBASIC19.14■□□□□ 0.65
CTNSO60931 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CTNSO60931 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNSO60931 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTNSO60931 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNSO60931 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNSO60931 KRT17P1-201ENST00000399211 1546 ntBASIC19.14■□□□□ 0.65
CTNSO60931 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CTNSO60931 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CTNSO60931 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTNSO60931 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.13■□□□□ 0.65
CTNSO60931 AC092118.2-201ENST00000613495 667 ntBASIC19.13■□□□□ 0.65
CTNSO60931 AC105020.6-201ENST00000621523 1217 ntBASIC19.13■□□□□ 0.65
CTNSO60931 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.13■□□□□ 0.65
CTNSO60931 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CTNSO60931 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.13■□□□□ 0.65
CTNSO60931 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNSO60931 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNSO60931 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNSO60931 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CTNSO60931 AC142086.2-201ENST00000569753 217 ntBASIC19.12■□□□□ 0.65
CTNSO60931 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.12■□□□□ 0.65
CTNSO60931 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.12■□□□□ 0.65
CTNSO60931 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CTNSO60931 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTNSO60931 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.12■□□□□ 0.65
CTNSO60931 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNSO60931 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTNSO60931 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.11■□□□□ 0.65
CTNSO60931 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNSO60931 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTNSO60931 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNSO60931 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.11■□□□□ 0.65
CTNSO60931 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNSO60931 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNSO60931 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNSO60931 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTNSO60931 AC073210.2-201ENST00000430369 194 ntBASIC19.11■□□□□ 0.65
CTNSO60931 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.11■□□□□ 0.65
CTNSO60931 AL138781.1-201ENST00000566567 1274 ntBASIC19.11■□□□□ 0.65
CTNSO60931 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNSO60931 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNSO60931 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms