Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.07■□□□□ 0.96
TSPAN3O60637 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN3O60637 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.06■□□□□ 0.96
TSPAN3O60637 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.06■□□□□ 0.96
TSPAN3O60637 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN3O60637 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN3O60637 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN3O60637 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.06■□□□□ 0.96
TSPAN3O60637 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.06■□□□□ 0.96
TSPAN3O60637 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TSPAN3O60637 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.06■□□□□ 0.96
TSPAN3O60637 FAM201B-201ENST00000458407 597 ntBASIC21.06■□□□□ 0.96
TSPAN3O60637 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN3O60637 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN3O60637 AC007375.3-201ENST00000600936 2314 ntBASIC21.06■□□□□ 0.96
TSPAN3O60637 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN3O60637 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN3O60637 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.06■□□□□ 0.96
TSPAN3O60637 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.05■□□□□ 0.96
TSPAN3O60637 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.05■□□□□ 0.96
TSPAN3O60637 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.05■□□□□ 0.96
TSPAN3O60637 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.05■□□□□ 0.96
TSPAN3O60637 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.05■□□□□ 0.96
TSPAN3O60637 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.05■□□□□ 0.96
TSPAN3O60637 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.05■□□□□ 0.96
TSPAN3O60637 AL356652.1-201ENST00000615962 565 ntBASIC21.05■□□□□ 0.96
TSPAN3O60637 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.05■□□□□ 0.96
TSPAN3O60637 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.05■□□□□ 0.96
TSPAN3O60637 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN3O60637 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TSPAN3O60637 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TSPAN3O60637 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.04■□□□□ 0.96
TSPAN3O60637 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TSPAN3O60637 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.04■□□□□ 0.96
TSPAN3O60637 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
TSPAN3O60637 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN3O60637 AC005229.4-201ENST00000610085 2198 ntBASIC21.03■□□□□ 0.96
TSPAN3O60637 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 PLK5-205ENST00000642079 1969 ntBASIC21.03■□□□□ 0.96
TSPAN3O60637 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.03■□□□□ 0.96
TSPAN3O60637 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.03■□□□□ 0.96
TSPAN3O60637 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.03■□□□□ 0.96
TSPAN3O60637 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.03■□□□□ 0.96
TSPAN3O60637 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.03■□□□□ 0.96
TSPAN3O60637 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.03■□□□□ 0.96
TSPAN3O60637 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TSPAN3O60637 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN3O60637 AC027702.1-201ENST00000563810 1770 ntBASIC21.02■□□□□ 0.96
TSPAN3O60637 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TSPAN3O60637 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TSPAN3O60637 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TSPAN3O60637 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.02■□□□□ 0.96
TSPAN3O60637 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.02■□□□□ 0.96
TSPAN3O60637 PGM5P4-201ENST00000421970 445 ntBASIC21.02■□□□□ 0.96
TSPAN3O60637 POU5F1P3-201ENST00000428824 1078 ntBASIC21.02■□□□□ 0.96
TSPAN3O60637 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.02■□□□□ 0.96
TSPAN3O60637 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.02■□□□□ 0.96
TSPAN3O60637 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TSPAN3O60637 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms