Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 CDCA4P2-201ENST00000441182 718 ntBASIC18.2■□□□□ 0.5
TRAF3IP2O43734 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 CYP21A1P-202ENST00000354927 1481 ntBASIC18.2■□□□□ 0.5
TRAF3IP2O43734 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 RAP2CP1-201ENST00000605103 478 ntBASIC18.19■□□□□ 0.5
TRAF3IP2O43734 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP2O43734 LINC01006-201ENST00000333319 2292 ntBASIC18.19■□□□□ 0.5
TRAF3IP2O43734 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 GABARAPL3-202ENST00000624044 1851 ntBASIC18.18■□□□□ 0.5
TRAF3IP2O43734 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP2O43734 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 AC087633.2-202ENST00000565166 1439 ntBASIC18.17■□□□□ 0.5
TRAF3IP2O43734 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 AC069236.1-201ENST00000604339 616 ntBASIC18.17■□□□□ 0.5
TRAF3IP2O43734 AC005181.1-201ENST00000604782 1256 ntBASIC18.17■□□□□ 0.5
TRAF3IP2O43734 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 LINC01521-201ENST00000504184 1943 ntBASIC18.17■□□□□ 0.5
TRAF3IP2O43734 AC020907.5-201ENST00000624372 1936 ntBASIC18.17■□□□□ 0.5
TRAF3IP2O43734 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 AC092667.1-201ENST00000434301 2586 ntBASIC18.17■□□□□ 0.5
TRAF3IP2O43734 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP2O43734 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 KRT8P36-201ENST00000489121 1440 ntBASIC18.16■□□□□ 0.5
TRAF3IP2O43734 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms