Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PROM1O43490 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PROM1O43490 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PROM1O43490 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PROM1O43490 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PROM1O43490 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PROM1O43490 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PROM1O43490 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PROM1O43490 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PROM1O43490 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PROM1O43490 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PROM1O43490 CDCA4P2-201ENST00000441182 718 ntBASIC19.36■□□□□ 0.69
PROM1O43490 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PROM1O43490 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.36■□□□□ 0.69
PROM1O43490 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.36■□□□□ 0.69
PROM1O43490 MIR2861-201ENST00000636310 90 ntBASIC19.36■□□□□ 0.69
PROM1O43490 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PROM1O43490 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.36■□□□□ 0.69
PROM1O43490 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PROM1O43490 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PROM1O43490 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.36■□□□□ 0.69
PROM1O43490 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.36■□□□□ 0.69
PROM1O43490 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.36■□□□□ 0.69
PROM1O43490 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.35■□□□□ 0.69
PROM1O43490 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PROM1O43490 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.35■□□□□ 0.69
PROM1O43490 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PROM1O43490 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PROM1O43490 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PROM1O43490 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PROM1O43490 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 FEM1AP1-201ENST00000431297 1995 ntBASIC19.35■□□□□ 0.69
PROM1O43490 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PROM1O43490 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PROM1O43490 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PROM1O43490 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.34■□□□□ 0.69
PROM1O43490 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PROM1O43490 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PROM1O43490 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PROM1O43490 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.34■□□□□ 0.69
PROM1O43490 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.34■□□□□ 0.69
PROM1O43490 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.34■□□□□ 0.69
PROM1O43490 RARRES2P4-201ENST00000514074 484 ntBASIC19.34■□□□□ 0.69
PROM1O43490 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.34■□□□□ 0.69
PROM1O43490 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.34■□□□□ 0.69
PROM1O43490 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.34■□□□□ 0.69
PROM1O43490 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.34■□□□□ 0.69
PROM1O43490 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.34■□□□□ 0.69
PROM1O43490 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.34■□□□□ 0.69
PROM1O43490 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
PROM1O43490 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PROM1O43490 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PROM1O43490 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PROM1O43490 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PROM1O43490 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.33■□□□□ 0.69
PROM1O43490 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PROM1O43490 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PROM1O43490 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.33■□□□□ 0.69
PROM1O43490 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PROM1O43490 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
PROM1O43490 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.33■□□□□ 0.69
PROM1O43490 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PROM1O43490 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PROM1O43490 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PROM1O43490 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.33■□□□□ 0.68
PROM1O43490 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PROM1O43490 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.33■□□□□ 0.68
PROM1O43490 RAP2CP1-201ENST00000605103 478 ntBASIC19.33■□□□□ 0.68
PROM1O43490 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PROM1O43490 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PROM1O43490 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PROM1O43490 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.33■□□□□ 0.68
PROM1O43490 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PROM1O43490 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PROM1O43490 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.33■□□□□ 0.68
PROM1O43490 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PROM1O43490 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.33■□□□□ 0.68
PROM1O43490 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms