Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.82■□□□□ 0.6
TO15178 AL355472.2-201ENST00000422958 438 ntBASIC18.82■□□□□ 0.6
TO15178 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TO15178 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.82■□□□□ 0.6
TO15178 AL589743.5-201ENST00000616611 1050 ntBASIC18.82■□□□□ 0.6
TO15178 AC105020.6-201ENST00000621523 1217 ntBASIC18.82■□□□□ 0.6
TO15178 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TO15178 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TO15178 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TO15178 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.82■□□□□ 0.6
TO15178 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TO15178 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.82■□□□□ 0.6
TO15178 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.82■□□□□ 0.6
TO15178 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TO15178 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TO15178 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TO15178 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TO15178 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TO15178 SLC29A4P1-201ENST00000398760 971 ntBASIC18.81■□□□□ 0.6
TO15178 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.81■□□□□ 0.6
TO15178 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TO15178 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.81■□□□□ 0.6
TO15178 FP700111.2-201ENST00000619190 1892 ntBASIC18.81■□□□□ 0.6
TO15178 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TO15178 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.81■□□□□ 0.6
TO15178 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.8■□□□□ 0.6
TO15178 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.8■□□□□ 0.6
TO15178 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TO15178 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TO15178 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TO15178 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TO15178 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TO15178 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.8■□□□□ 0.6
TO15178 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
TO15178 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TO15178 MIPEPP3-201ENST00000412105 444 ntBASIC18.8■□□□□ 0.6
TO15178 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
TO15178 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.8■□□□□ 0.6
TO15178 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.8■□□□□ 0.6
TO15178 AC104771.1-201ENST00000603335 964 ntBASIC18.8■□□□□ 0.6
TO15178 AL109923.1-201ENST00000618799 583 ntBASIC18.8■□□□□ 0.6
TO15178 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.8■□□□□ 0.6
TO15178 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TO15178 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.8■□□□□ 0.6
TO15178 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.8■□□□□ 0.6
TO15178 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TO15178 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
TO15178 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.79■□□□□ 0.6
TO15178 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TO15178 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.79■□□□□ 0.6
TO15178 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TO15178 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TO15178 BX276092.2-201ENST00000417668 665 ntBASIC18.79■□□□□ 0.6
TO15178 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.79■□□□□ 0.6
TO15178 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.79■□□□□ 0.6
TO15178 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
TO15178 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 KRT17P1-201ENST00000399211 1546 ntBASIC18.79■□□□□ 0.6
TO15178 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
TO15178 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.79■□□□□ 0.6
TO15178 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TO15178 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TO15178 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.78■□□□□ 0.6
TO15178 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TO15178 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TO15178 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.78■□□□□ 0.6
TO15178 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TO15178 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TO15178 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TO15178 ID1-201ENST00000376105 1233 ntBASIC18.78■□□□□ 0.6
TO15178 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.78■□□□□ 0.6
TO15178 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.78■□□□□ 0.6
TO15178 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.78■□□□□ 0.6
TO15178 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.78■□□□□ 0.6
TO15178 AC092118.2-201ENST00000613495 667 ntBASIC18.78■□□□□ 0.6
TO15178 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.78■□□□□ 0.6
TO15178 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TO15178 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TO15178 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TO15178 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TO15178 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TO15178 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TO15178 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TO15178 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TO15178 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TO15178 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
TO15178 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.77■□□□□ 0.6
TO15178 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TO15178 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TO15178 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms