Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TAF4O00268 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TAF4O00268 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.94■□□□□ 0.78
TAF4O00268 AC233702.5-201ENST00000584107 538 ntBASIC19.94■□□□□ 0.78
TAF4O00268 HLA-B-256ENST00000639848 1089 ntBASIC19.94■□□□□ 0.78
TAF4O00268 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TAF4O00268 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.94■□□□□ 0.78
TAF4O00268 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.94■□□□□ 0.78
TAF4O00268 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 KRT17P1-201ENST00000399211 1546 ntBASIC19.93■□□□□ 0.78
TAF4O00268 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TAF4O00268 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.93■□□□□ 0.78
TAF4O00268 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TAF4O00268 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.93■□□□□ 0.78
TAF4O00268 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TAF4O00268 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TAF4O00268 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 RPS2P55-201ENST00000397318 883 ntBASIC19.92■□□□□ 0.78
TAF4O00268 AC012618.2-201ENST00000428058 849 ntBASIC19.92■□□□□ 0.78
TAF4O00268 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 AC107956.1-201ENST00000494359 873 ntBASIC19.92■□□□□ 0.78
TAF4O00268 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.92■□□□□ 0.78
TAF4O00268 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
TAF4O00268 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TAF4O00268 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.91■□□□□ 0.78
TAF4O00268 AC026310.3-201ENST00000625186 2373 ntBASIC19.91■□□□□ 0.78
TAF4O00268 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TAF4O00268 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TAF4O00268 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TAF4O00268 TMPOP1-202ENST00000424642 1267 ntBASIC19.91■□□□□ 0.78
TAF4O00268 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.91■□□□□ 0.78
TAF4O00268 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.91■□□□□ 0.78
TAF4O00268 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.91■□□□□ 0.78
TAF4O00268 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TAF4O00268 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TAF4O00268 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TAF4O00268 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.91■□□□□ 0.78
TAF4O00268 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TAF4O00268 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
TAF4O00268 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TAF4O00268 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.9■□□□□ 0.78
TAF4O00268 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TAF4O00268 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.9■□□□□ 0.78
TAF4O00268 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TAF4O00268 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.9■□□□□ 0.78
TAF4O00268 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.9■□□□□ 0.78
TAF4O00268 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TAF4O00268 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.9■□□□□ 0.78
TAF4O00268 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TAF4O00268 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TAF4O00268 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TAF4O00268 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.9■□□□□ 0.78
TAF4O00268 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TAF4O00268 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TAF4O00268 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.89■□□□□ 0.78
TAF4O00268 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TAF4O00268 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TAF4O00268 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TAF4O00268 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TAF4O00268 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TAF4O00268 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TAF4O00268 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TAF4O00268 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TAF4O00268 AL355472.2-201ENST00000422958 438 ntBASIC19.89■□□□□ 0.77
TAF4O00268 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TAF4O00268 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.89■□□□□ 0.77
TAF4O00268 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
TAF4O00268 RN7SL850P-201ENST00000579959 291 ntBASIC19.89■□□□□ 0.77
TAF4O00268 RBM17P2-201ENST00000616397 1405 ntBASIC19.89■□□□□ 0.77
TAF4O00268 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms