Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.26■□□□□ 0.83
TLR4O00206 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TLR4O00206 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TLR4O00206 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.26■□□□□ 0.83
TLR4O00206 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TLR4O00206 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.26■□□□□ 0.83
TLR4O00206 C1QBPP2-201ENST00000528754 825 ntBASIC20.26■□□□□ 0.83
TLR4O00206 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.26■□□□□ 0.83
TLR4O00206 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.26■□□□□ 0.83
TLR4O00206 C2orf69P4-201ENST00000565394 541 ntBASIC20.26■□□□□ 0.83
TLR4O00206 RN7SL471P-201ENST00000580476 299 ntBASIC20.26■□□□□ 0.83
TLR4O00206 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.26■□□□□ 0.83
TLR4O00206 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TLR4O00206 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
TLR4O00206 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TLR4O00206 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.26■□□□□ 0.83
TLR4O00206 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR4O00206 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TLR4O00206 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR4O00206 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR4O00206 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR4O00206 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TLR4O00206 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TLR4O00206 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.25■□□□□ 0.83
TLR4O00206 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.25■□□□□ 0.83
TLR4O00206 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TLR4O00206 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.25■□□□□ 0.83
TLR4O00206 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.25■□□□□ 0.83
TLR4O00206 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.25■□□□□ 0.83
TLR4O00206 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.25■□□□□ 0.83
TLR4O00206 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.25■□□□□ 0.83
TLR4O00206 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.25■□□□□ 0.83
TLR4O00206 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.25■□□□□ 0.83
TLR4O00206 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.25■□□□□ 0.83
TLR4O00206 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR4O00206 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TLR4O00206 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR4O00206 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR4O00206 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TLR4O00206 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
TLR4O00206 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.24■□□□□ 0.83
TLR4O00206 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TLR4O00206 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TLR4O00206 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.24■□□□□ 0.83
TLR4O00206 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TLR4O00206 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TLR4O00206 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TLR4O00206 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TLR4O00206 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.23■□□□□ 0.83
TLR4O00206 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.23■□□□□ 0.83
TLR4O00206 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TLR4O00206 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.23■□□□□ 0.83
TLR4O00206 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.23■□□□□ 0.83
TLR4O00206 AC087633.2-202ENST00000565166 1439 ntBASIC20.23■□□□□ 0.83
TLR4O00206 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.23■□□□□ 0.83
TLR4O00206 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.23■□□□□ 0.83
TLR4O00206 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.23■□□□□ 0.83
TLR4O00206 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR4O00206 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
TLR4O00206 AL137060.1-201ENST00000618151 2648 ntBASIC20.23■□□□□ 0.83
TLR4O00206 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TLR4O00206 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
TLR4O00206 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TLR4O00206 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.22■□□□□ 0.83
TLR4O00206 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TLR4O00206 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TLR4O00206 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TLR4O00206 POM121L13P-201ENST00000422362 380 ntBASIC20.22■□□□□ 0.83
TLR4O00206 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.22■□□□□ 0.83
TLR4O00206 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TLR4O00206 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TLR4O00206 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.22■□□□□ 0.83
TLR4O00206 AC233263.1-201ENST00000578059 224 ntBASIC20.22■□□□□ 0.83
TLR4O00206 AC069544.1-201ENST00000609399 999 ntBASIC20.22■□□□□ 0.83
TLR4O00206 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.22■□□□□ 0.83
TLR4O00206 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TLR4O00206 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TLR4O00206 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TLR4O00206 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms