Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA2E9PIF3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
NPIPA2E9PIF3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA2E9PIF3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA2E9PIF3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA2E9PIF3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA2E9PIF3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NPIPA2E9PIF3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 AL589743.5-201ENST00000616611 1050 ntBASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 AF106564.1-201ENST00000607058 2553 ntBASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 AL049796.1-201ENST00000565336 1766 ntBASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NPIPA2E9PIF3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 CLDN5-201ENST00000403084 2357 ntBASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA2E9PIF3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 KRT18P68-201ENST00000392293 1000 ntBASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA2E9PIF3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 PRORSD1P-201ENST00000295112 541 ntBASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 AC116050.2-201ENST00000612102 1779 ntBASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms