Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL1A6NKG5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
RTL1A6NKG5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RTL1A6NKG5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RTL1A6NKG5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RTL1A6NKG5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RTL1A6NKG5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC27.27■■□□□ 1.96
RTL1A6NKG5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC27.27■■□□□ 1.96
RTL1A6NKG5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RTL1A6NKG5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC27.27■■□□□ 1.96
RTL1A6NKG5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
RTL1A6NKG5 AC244015.2-201ENST00000616358 1861 ntBASIC27.27■■□□□ 1.96
RTL1A6NKG5 AC006557.6-201ENST00000623071 864 ntBASIC27.27■■□□□ 1.96
RTL1A6NKG5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RTL1A6NKG5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RTL1A6NKG5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC27.27■■□□□ 1.96
RTL1A6NKG5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC27.27■■□□□ 1.96
RTL1A6NKG5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RTL1A6NKG5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
RTL1A6NKG5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC27.26■■□□□ 1.95
RTL1A6NKG5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC27.26■■□□□ 1.95
RTL1A6NKG5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTL1A6NKG5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTL1A6NKG5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTL1A6NKG5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RTL1A6NKG5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTL1A6NKG5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC27.25■■□□□ 1.95
RTL1A6NKG5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC27.25■■□□□ 1.95
RTL1A6NKG5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RTL1A6NKG5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC27.25■■□□□ 1.95
RTL1A6NKG5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTL1A6NKG5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTL1A6NKG5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTL1A6NKG5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTL1A6NKG5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTL1A6NKG5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC27.25■■□□□ 1.95
RTL1A6NKG5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTL1A6NKG5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTL1A6NKG5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
RTL1A6NKG5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC27.24■■□□□ 1.95
RTL1A6NKG5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL1A6NKG5 AL390719.1-204ENST00000412397 1219 ntBASIC27.24■■□□□ 1.95
RTL1A6NKG5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC27.24■■□□□ 1.95
RTL1A6NKG5 AL023875.1-201ENST00000640777 796 ntBASIC27.24■■□□□ 1.95
RTL1A6NKG5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RTL1A6NKG5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL1A6NKG5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RTL1A6NKG5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
RTL1A6NKG5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL1A6NKG5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC27.24■■□□□ 1.95
RTL1A6NKG5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC27.24■■□□□ 1.95
RTL1A6NKG5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC27.23■■□□□ 1.95
RTL1A6NKG5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.23■■□□□ 1.95
RTL1A6NKG5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC27.23■■□□□ 1.95
RTL1A6NKG5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
RTL1A6NKG5 EP400NL-214ENST00000641289 2402 ntBASIC27.23■■□□□ 1.95
RTL1A6NKG5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RTL1A6NKG5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC27.23■■□□□ 1.95
RTL1A6NKG5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTL1A6NKG5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RTL1A6NKG5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTL1A6NKG5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTL1A6NKG5 RPS2P55-201ENST00000397318 883 ntBASIC27.22■■□□□ 1.95
RTL1A6NKG5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC27.22■■□□□ 1.95
RTL1A6NKG5 AC107956.1-201ENST00000494359 873 ntBASIC27.22■■□□□ 1.95
RTL1A6NKG5 AC073912.3-201ENST00000624414 853 ntBASIC27.22■■□□□ 1.95
RTL1A6NKG5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
RTL1A6NKG5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RTL1A6NKG5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTL1A6NKG5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTL1A6NKG5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTL1A6NKG5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC27.22■■□□□ 1.95
RTL1A6NKG5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
RTL1A6NKG5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
RTL1A6NKG5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTL1A6NKG5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTL1A6NKG5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC27.22■■□□□ 1.95
RTL1A6NKG5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RTL1A6NKG5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC27.22■■□□□ 1.95
RTL1A6NKG5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTL1A6NKG5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 KRASP1-201ENST00000407852 552 ntBASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms