Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RCCD1A6NED2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RCCD1A6NED2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.73■■□□□ 1.07
RCCD1A6NED2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
RCCD1A6NED2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RCCD1A6NED2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RCCD1A6NED2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RCCD1A6NED2 AC079140.4-201ENST00000507448 529 ntBASIC21.73■■□□□ 1.07
RCCD1A6NED2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RCCD1A6NED2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.73■■□□□ 1.07
RCCD1A6NED2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RCCD1A6NED2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RCCD1A6NED2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RCCD1A6NED2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 KRT16P2-201ENST00000414673 1423 ntBASIC21.72■■□□□ 1.07
RCCD1A6NED2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.72■■□□□ 1.07
RCCD1A6NED2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCCD1A6NED2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RCCD1A6NED2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RCCD1A6NED2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RCCD1A6NED2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RCCD1A6NED2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RCCD1A6NED2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RCCD1A6NED2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.71■■□□□ 1.07
RCCD1A6NED2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RCCD1A6NED2 SLC7A5P2-201ENST00000553010 536 ntBASIC21.71■■□□□ 1.07
RCCD1A6NED2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RCCD1A6NED2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RCCD1A6NED2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.71■■□□□ 1.07
RCCD1A6NED2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RCCD1A6NED2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
RCCD1A6NED2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.7■■□□□ 1.07
RCCD1A6NED2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.7■■□□□ 1.07
RCCD1A6NED2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.7■■□□□ 1.06
RCCD1A6NED2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.7■■□□□ 1.06
RCCD1A6NED2 AC245052.3-201ENST00000450182 901 ntBASIC21.7■■□□□ 1.06
RCCD1A6NED2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.7■■□□□ 1.06
RCCD1A6NED2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.7■■□□□ 1.06
RCCD1A6NED2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.7■■□□□ 1.06
RCCD1A6NED2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.7■■□□□ 1.06
RCCD1A6NED2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RCCD1A6NED2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.69■■□□□ 1.06
RCCD1A6NED2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.69■■□□□ 1.06
RCCD1A6NED2 AC116050.2-201ENST00000612102 1779 ntBASIC21.69■■□□□ 1.06
RCCD1A6NED2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.69■■□□□ 1.06
RCCD1A6NED2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
RCCD1A6NED2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RCCD1A6NED2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCCD1A6NED2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.69■■□□□ 1.06
RCCD1A6NED2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.69■■□□□ 1.06
RCCD1A6NED2 AL691432.2-201ENST00000607222 2038 ntBASIC21.68■■□□□ 1.06
RCCD1A6NED2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RCCD1A6NED2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RCCD1A6NED2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 AC010141.2-201ENST00000452426 721 ntBASIC21.68■■□□□ 1.06
RCCD1A6NED2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms