Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.8■□□□□ 0.92
TBC1D3BA6NDS4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.8■□□□□ 0.92
TBC1D3BA6NDS4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TBC1D3BA6NDS4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3BA6NDS4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3BA6NDS4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.8■□□□□ 0.92
TBC1D3BA6NDS4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 AC244015.2-201ENST00000616358 1861 ntBASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3BA6NDS4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 PKD1P6-201ENST00000343738 4769 ntBASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 MIR718-201ENST00000390190 70 ntBASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 AL117328.2-201ENST00000624617 1940 ntBASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
TBC1D3BA6NDS4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 AL390719.1-204ENST00000412397 1219 ntBASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 AC005829.2-201ENST00000571422 1056 ntBASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 AC006557.6-201ENST00000623071 864 ntBASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 AC011484.1-201ENST00000377652 1995 ntBASIC20.77■□□□□ 0.92
TBC1D3BA6NDS4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.77■□□□□ 0.91
TBC1D3BA6NDS4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
TBC1D3BA6NDS4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TBC1D3BA6NDS4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 AC120498.8-201ENST00000614275 531 ntBASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.76■□□□□ 0.91
TBC1D3BA6NDS4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms