Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM49BA6NDI0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
TRIM49BA6NDI0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 SMG8-203ENST00000578922 2178 ntBASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 AC007322.3-201ENST00000426526 701 ntBASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 AC034268.1-201ENST00000441047 882 ntBASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 MIR6821-201ENST00000617625 74 ntBASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
TRIM49BA6NDI0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM49BA6NDI0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM49BA6NDI0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.48■■□□□ 1.19
TRIM49BA6NDI0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms