Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HFM1A2PYH4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HFM1A2PYH4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
HFM1A2PYH4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC30.39■■■□□ 2.46
HFM1A2PYH4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
HFM1A2PYH4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
HFM1A2PYH4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HFM1A2PYH4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
HFM1A2PYH4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC30.39■■■□□ 2.46
HFM1A2PYH4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.39■■■□□ 2.45
HFM1A2PYH4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
HFM1A2PYH4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
HFM1A2PYH4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC30.39■■■□□ 2.45
HFM1A2PYH4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC30.39■■■□□ 2.45
HFM1A2PYH4 AC092368.3-202ENST00000574180 1591 ntBASIC30.38■■■□□ 2.45
HFM1A2PYH4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
HFM1A2PYH4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC30.38■■■□□ 2.45
HFM1A2PYH4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC30.38■■■□□ 2.45
HFM1A2PYH4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
HFM1A2PYH4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HFM1A2PYH4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HFM1A2PYH4 ITM2C-210ENST00000620962 501 ntBASIC30.38■■■□□ 2.45
HFM1A2PYH4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HFM1A2PYH4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC30.37■■■□□ 2.45
HFM1A2PYH4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HFM1A2PYH4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC30.37■■■□□ 2.45
HFM1A2PYH4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.37■■■□□ 2.45
HFM1A2PYH4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
HFM1A2PYH4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC30.37■■■□□ 2.45
HFM1A2PYH4 AC026366.1-201ENST00000488803 879 ntBASIC30.37■■■□□ 2.45
HFM1A2PYH4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HFM1A2PYH4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.37■■■□□ 2.45
HFM1A2PYH4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC30.37■■■□□ 2.45
HFM1A2PYH4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC30.37■■■□□ 2.45
HFM1A2PYH4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
HFM1A2PYH4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
HFM1A2PYH4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
HFM1A2PYH4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HFM1A2PYH4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HFM1A2PYH4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
HFM1A2PYH4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HFM1A2PYH4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC30.36■■■□□ 2.45
HFM1A2PYH4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC30.35■■■□□ 2.45
HFM1A2PYH4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
HFM1A2PYH4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC30.35■■■□□ 2.45
HFM1A2PYH4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC30.35■■■□□ 2.45
HFM1A2PYH4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.35■■■□□ 2.45
HFM1A2PYH4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC30.35■■■□□ 2.45
HFM1A2PYH4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC30.35■■■□□ 2.45
HFM1A2PYH4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 PTBP1P-201ENST00000554374 1601 ntBASIC30.35■■■□□ 2.45
HFM1A2PYH4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
HFM1A2PYH4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
HFM1A2PYH4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
HFM1A2PYH4 ESRRAP1-201ENST00000400596 1257 ntBASIC30.34■■■□□ 2.45
HFM1A2PYH4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC30.34■■■□□ 2.45
HFM1A2PYH4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC30.34■■■□□ 2.45
HFM1A2PYH4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
HFM1A2PYH4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
HFM1A2PYH4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
HFM1A2PYH4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC30.33■■■□□ 2.45
HFM1A2PYH4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
HFM1A2PYH4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
HFM1A2PYH4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.33■■■□□ 2.45
HFM1A2PYH4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
HFM1A2PYH4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC30.33■■■□□ 2.45
HFM1A2PYH4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
HFM1A2PYH4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
HFM1A2PYH4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
HFM1A2PYH4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
HFM1A2PYH4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
HFM1A2PYH4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
HFM1A2PYH4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.32■■■□□ 2.44
HFM1A2PYH4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
HFM1A2PYH4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC30.32■■■□□ 2.44
HFM1A2PYH4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
HFM1A2PYH4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
HFM1A2PYH4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC30.32■■■□□ 2.44
HFM1A2PYH4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
HFM1A2PYH4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
HFM1A2PYH4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
HFM1A2PYH4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms