Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 EEF1DP3-203ENST00000566025 782 ntBASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 AC053503.5-201ENST00000601508 636 ntBASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRAV5A0A0B4J249 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV5A0A0B4J249 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV5A0A0B4J249 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRAV5A0A0B4J249 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV5A0A0B4J249 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.83■□□□□ 0.13
TRAV5A0A0B4J249 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 AC099791.1-201ENST00000416440 715 ntBASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV5A0A0B4J249 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 AC135279.3-201ENST00000610945 1311 ntBASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 AC116562.4-201ENST00000641316 2276 ntBASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV5A0A0B4J249 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 SMG8-203ENST00000578922 2178 ntBASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV5A0A0B4J249 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV5A0A0B4J249 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms