Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rsph9Q9D9V4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.85■■□□□ 1.41
Rsph9Q9D9V4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rsph9Q9D9V4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rsph9Q9D9V4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rsph9Q9D9V4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rsph9Q9D9V4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Rsph9Q9D9V4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rsph9Q9D9V4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rsph9Q9D9V4 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.83■■□□□ 1.41
Rsph9Q9D9V4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rsph9Q9D9V4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rsph9Q9D9V4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rsph9Q9D9V4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Rsph9Q9D9V4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rsph9Q9D9V4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rsph9Q9D9V4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.8■■□□□ 1.4
Rsph9Q9D9V4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rsph9Q9D9V4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rsph9Q9D9V4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rsph9Q9D9V4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rsph9Q9D9V4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rsph9Q9D9V4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rsph9Q9D9V4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rsph9Q9D9V4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.77■■□□□ 1.4
Rsph9Q9D9V4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rsph9Q9D9V4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rsph9Q9D9V4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rsph9Q9D9V4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rsph9Q9D9V4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rsph9Q9D9V4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rsph9Q9D9V4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rsph9Q9D9V4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
Rsph9Q9D9V4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rsph9Q9D9V4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rsph9Q9D9V4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rsph9Q9D9V4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.71■■□□□ 1.39
Rsph9Q9D9V4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rsph9Q9D9V4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph9Q9D9V4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.7■■□□□ 1.38
Rsph9Q9D9V4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph9Q9D9V4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph9Q9D9V4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Rsph9Q9D9V4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph9Q9D9V4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph9Q9D9V4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Rsph9Q9D9V4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rsph9Q9D9V4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.67■■□□□ 1.38
Rsph9Q9D9V4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.66■■□□□ 1.38
Rsph9Q9D9V4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rsph9Q9D9V4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rsph9Q9D9V4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph9Q9D9V4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Rsph9Q9D9V4 Gm7432-201ENSMUST00000210343 879 ntBASIC23.63■■□□□ 1.37
Rsph9Q9D9V4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph9Q9D9V4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Rsph9Q9D9V4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Rsph9Q9D9V4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rsph9Q9D9V4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Rsph9Q9D9V4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.6■■□□□ 1.37
Rsph9Q9D9V4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rsph9Q9D9V4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph9Q9D9V4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.59■■□□□ 1.37
Rsph9Q9D9V4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rsph9Q9D9V4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph9Q9D9V4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph9Q9D9V4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph9Q9D9V4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.57■■□□□ 1.36
Rsph9Q9D9V4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph9Q9D9V4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph9Q9D9V4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph9Q9D9V4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.56■■□□□ 1.36
Rsph9Q9D9V4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
Rsph9Q9D9V4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rsph9Q9D9V4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Rsph9Q9D9V4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rsph9Q9D9V4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph9Q9D9V4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.55■■□□□ 1.36
Rsph9Q9D9V4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.55■■□□□ 1.36
Rsph9Q9D9V4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph9Q9D9V4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rsph9Q9D9V4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rsph9Q9D9V4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Rsph9Q9D9V4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rsph9Q9D9V4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rsph9Q9D9V4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.54■■□□□ 1.36
Rsph9Q9D9V4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.53■■□□□ 1.36
Rsph9Q9D9V4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rsph9Q9D9V4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Rsph9Q9D9V4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Rsph9Q9D9V4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.51■■□□□ 1.35
Rsph9Q9D9V4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rsph9Q9D9V4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.49■■□□□ 1.35
Rsph9Q9D9V4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.48■■□□□ 1.35
Rsph9Q9D9V4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rsph9Q9D9V4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rsph9Q9D9V4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.48■■□□□ 1.35
Rsph9Q9D9V4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Rsph9Q9D9V4 Gm11599-201ENSMUST00000118720 878 ntBASIC23.47■■□□□ 1.35
Rsph9Q9D9V4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms