Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Lsm7Q9CQQ8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Lsm7Q9CQQ8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lsm7Q9CQQ8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Lsm7Q9CQQ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.75■■□□□ 1.55
Lsm7Q9CQQ8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Lsm7Q9CQQ8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lsm7Q9CQQ8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lsm7Q9CQQ8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Lsm7Q9CQQ8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Lsm7Q9CQQ8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Lsm7Q9CQQ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
Lsm7Q9CQQ8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.72■■□□□ 1.55
Lsm7Q9CQQ8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.72■■□□□ 1.55
Lsm7Q9CQQ8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Lsm7Q9CQQ8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lsm7Q9CQQ8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Lsm7Q9CQQ8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Lsm7Q9CQQ8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Lsm7Q9CQQ8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Lsm7Q9CQQ8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Lsm7Q9CQQ8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.67■■□□□ 1.54
Lsm7Q9CQQ8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Lsm7Q9CQQ8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.66■■□□□ 1.54
Lsm7Q9CQQ8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.66■■□□□ 1.54
Lsm7Q9CQQ8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Lsm7Q9CQQ8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Lsm7Q9CQQ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.64■■□□□ 1.54
Lsm7Q9CQQ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Lsm7Q9CQQ8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.64■■□□□ 1.53
Lsm7Q9CQQ8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Lsm7Q9CQQ8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Lsm7Q9CQQ8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Lsm7Q9CQQ8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Lsm7Q9CQQ8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Lsm7Q9CQQ8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Lsm7Q9CQQ8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.59■■□□□ 1.53
Lsm7Q9CQQ8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Lsm7Q9CQQ8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Lsm7Q9CQQ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Lsm7Q9CQQ8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Lsm7Q9CQQ8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Lsm7Q9CQQ8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
Lsm7Q9CQQ8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.58■■□□□ 1.53
Lsm7Q9CQQ8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Lsm7Q9CQQ8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Lsm7Q9CQQ8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lsm7Q9CQQ8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Lsm7Q9CQQ8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Lsm7Q9CQQ8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Lsm7Q9CQQ8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lsm7Q9CQQ8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.56■■□□□ 1.52
Lsm7Q9CQQ8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.55■■□□□ 1.52
Lsm7Q9CQQ8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Lsm7Q9CQQ8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Lsm7Q9CQQ8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.54■■□□□ 1.52
Lsm7Q9CQQ8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.54■■□□□ 1.52
Lsm7Q9CQQ8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Lsm7Q9CQQ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Lsm7Q9CQQ8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Lsm7Q9CQQ8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Lsm7Q9CQQ8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Lsm7Q9CQQ8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Lsm7Q9CQQ8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lsm7Q9CQQ8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lsm7Q9CQQ8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lsm7Q9CQQ8 Zxda-201ENSMUST00000117281 2621 ntBASIC24.5■■□□□ 1.51
Lsm7Q9CQQ8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Lsm7Q9CQQ8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Lsm7Q9CQQ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Lsm7Q9CQQ8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lsm7Q9CQQ8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lsm7Q9CQQ8 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.48■■□□□ 1.51
Lsm7Q9CQQ8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Lsm7Q9CQQ8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lsm7Q9CQQ8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.47■■□□□ 1.51
Lsm7Q9CQQ8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.46■■□□□ 1.51
Lsm7Q9CQQ8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Lsm7Q9CQQ8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lsm7Q9CQQ8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lsm7Q9CQQ8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.46■■□□□ 1.51
Lsm7Q9CQQ8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.46■■□□□ 1.51
Lsm7Q9CQQ8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lsm7Q9CQQ8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Lsm7Q9CQQ8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.45■■□□□ 1.5
Lsm7Q9CQQ8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lsm7Q9CQQ8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Lsm7Q9CQQ8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lsm7Q9CQQ8 Gm7432-201ENSMUST00000210343 879 ntBASIC24.43■■□□□ 1.5
Lsm7Q9CQQ8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lsm7Q9CQQ8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lsm7Q9CQQ8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Lsm7Q9CQQ8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.41■■□□□ 1.5
Lsm7Q9CQQ8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Lsm7Q9CQQ8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Lsm7Q9CQQ8 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.41■■□□□ 1.5
Lsm7Q9CQQ8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.38■■□□□ 1.49
Lsm7Q9CQQ8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.38■■□□□ 1.49
Lsm7Q9CQQ8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lsm7Q9CQQ8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms