Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC025884.2-201ENST00000553429 711 ntBASIC8.48□□□□□ -1.05
HMCN1Q96RW7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC8.48□□□□□ -1.05
HMCN1Q96RW7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HMCN1Q96RW7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC8.48□□□□□ -1.05
HMCN1Q96RW7 ATP5G2P3-201ENST00000429083 425 ntBASIC8.48□□□□□ -1.05
HMCN1Q96RW7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC8.48□□□□□ -1.05
HMCN1Q96RW7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
HMCN1Q96RW7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HMCN1Q96RW7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC8.48□□□□□ -1.05
HMCN1Q96RW7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HMCN1Q96RW7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.05
HMCN1Q96RW7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HMCN1Q96RW7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC8.46□□□□□ -1.06
HMCN1Q96RW7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HMCN1Q96RW7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC8.45□□□□□ -1.06
HMCN1Q96RW7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC8.45□□□□□ -1.06
HMCN1Q96RW7 AC131212.1-201ENST00000613771 668 ntBASIC8.45□□□□□ -1.06
HMCN1Q96RW7 AC108673.1-201ENST00000510422 1159 ntBASIC8.45□□□□□ -1.06
HMCN1Q96RW7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HMCN1Q96RW7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC8.45□□□□□ -1.06
HMCN1Q96RW7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HMCN1Q96RW7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC8.45□□□□□ -1.06
HMCN1Q96RW7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
HMCN1Q96RW7 U85056.1-201ENST00000616429 682 ntBASIC8.44□□□□□ -1.06
HMCN1Q96RW7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HMCN1Q96RW7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
HMCN1Q96RW7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC8.44□□□□□ -1.06
HMCN1Q96RW7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC8.43□□□□□ -1.06
HMCN1Q96RW7 AC092666.2-201ENST00000613287 246 ntBASIC8.43□□□□□ -1.06
HMCN1Q96RW7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC8.43□□□□□ -1.06
HMCN1Q96RW7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC8.43□□□□□ -1.06
HMCN1Q96RW7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 THA1P-201ENST00000590384 1145 ntBASIC8.42□□□□□ -1.06
HMCN1Q96RW7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC8.42□□□□□ -1.06
HMCN1Q96RW7 HES4-204ENST00000484667 667 ntTSL 3 BASIC8.41□□□□□ -1.06
HMCN1Q96RW7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HMCN1Q96RW7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC8.41□□□□□ -1.06
HMCN1Q96RW7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
HMCN1Q96RW7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HMCN1Q96RW7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC8.41□□□□□ -1.06
HMCN1Q96RW7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
HMCN1Q96RW7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HMCN1Q96RW7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
HMCN1Q96RW7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HMCN1Q96RW7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
HMCN1Q96RW7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC8.4□□□□□ -1.07
HMCN1Q96RW7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HMCN1Q96RW7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMCN1Q96RW7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMCN1Q96RW7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMCN1Q96RW7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC8.39□□□□□ -1.07
HMCN1Q96RW7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMCN1Q96RW7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMCN1Q96RW7 AL356441.2-201ENST00000443009 864 ntBASIC8.39□□□□□ -1.07
HMCN1Q96RW7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMCN1Q96RW7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC8.38□□□□□ -1.07
HMCN1Q96RW7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMCN1Q96RW7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMCN1Q96RW7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMCN1Q96RW7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMCN1Q96RW7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC8.38□□□□□ -1.07
HMCN1Q96RW7 KRT18P60-201ENST00000312876 1297 ntBASIC8.38□□□□□ -1.07
HMCN1Q96RW7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC8.37□□□□□ -1.07
HMCN1Q96RW7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMCN1Q96RW7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HMCN1Q96RW7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HMCN1Q96RW7 AC022413.1-201ENST00000624602 984 ntBASIC8.36□□□□□ -1.07
HMCN1Q96RW7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
HMCN1Q96RW7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC8.35□□□□□ -1.07
HMCN1Q96RW7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN1Q96RW7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
HMCN1Q96RW7 CHML-204ENST00000638121 920 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN1Q96RW7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC8.35□□□□□ -1.07
HMCN1Q96RW7 OR2A1-AS1-204ENST00000470435 602 ntBASIC8.35□□□□□ -1.07
HMCN1Q96RW7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN1Q96RW7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms