Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Zcchc9Q8R1J3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Zcchc9Q8R1J3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
Zcchc9Q8R1J3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Zcchc9Q8R1J3 Gm7432-201ENSMUST00000210343 879 ntBASIC24.26■■□□□ 1.47
Zcchc9Q8R1J3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Zcchc9Q8R1J3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Zcchc9Q8R1J3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Zcchc9Q8R1J3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zcchc9Q8R1J3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zcchc9Q8R1J3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Zcchc9Q8R1J3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.23■■□□□ 1.47
Zcchc9Q8R1J3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zcchc9Q8R1J3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zcchc9Q8R1J3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zcchc9Q8R1J3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zcchc9Q8R1J3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zcchc9Q8R1J3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.18■■□□□ 1.46
Zcchc9Q8R1J3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Zcchc9Q8R1J3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Zcchc9Q8R1J3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Zcchc9Q8R1J3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Zcchc9Q8R1J3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Zcchc9Q8R1J3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.14■■□□□ 1.45
Zcchc9Q8R1J3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Zcchc9Q8R1J3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Zcchc9Q8R1J3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Zcchc9Q8R1J3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Zcchc9Q8R1J3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Zcchc9Q8R1J3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
Zcchc9Q8R1J3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
Zcchc9Q8R1J3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Zcchc9Q8R1J3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Zcchc9Q8R1J3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Zcchc9Q8R1J3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Zcchc9Q8R1J3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Zcchc9Q8R1J3 Gm11599-201ENSMUST00000118720 878 ntBASIC24.1■■□□□ 1.45
Zcchc9Q8R1J3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Zcchc9Q8R1J3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Zcchc9Q8R1J3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Zcchc9Q8R1J3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Zcchc9Q8R1J3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Zcchc9Q8R1J3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Zcchc9Q8R1J3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Zcchc9Q8R1J3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Zcchc9Q8R1J3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Zcchc9Q8R1J3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.06■■□□□ 1.44
Zcchc9Q8R1J3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.05■■□□□ 1.44
Zcchc9Q8R1J3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zcchc9Q8R1J3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zcchc9Q8R1J3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Zcchc9Q8R1J3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.04■■□□□ 1.44
Zcchc9Q8R1J3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.04■■□□□ 1.44
Zcchc9Q8R1J3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Zcchc9Q8R1J3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zcchc9Q8R1J3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Zcchc9Q8R1J3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.01■■□□□ 1.43
Zcchc9Q8R1J3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Zcchc9Q8R1J3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
Zcchc9Q8R1J3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24■■□□□ 1.43
Zcchc9Q8R1J3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24■■□□□ 1.43
Zcchc9Q8R1J3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24■■□□□ 1.43
Zcchc9Q8R1J3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.99■■□□□ 1.43
Zcchc9Q8R1J3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Zcchc9Q8R1J3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Zcchc9Q8R1J3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Zcchc9Q8R1J3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zcchc9Q8R1J3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Zcchc9Q8R1J3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zcchc9Q8R1J3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Zcchc9Q8R1J3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.97■■□□□ 1.43
Zcchc9Q8R1J3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zcchc9Q8R1J3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zcchc9Q8R1J3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.96■■□□□ 1.43
Zcchc9Q8R1J3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Zcchc9Q8R1J3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zcchc9Q8R1J3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zcchc9Q8R1J3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zcchc9Q8R1J3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.93■■□□□ 1.42
Zcchc9Q8R1J3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Zcchc9Q8R1J3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.92■■□□□ 1.42
Zcchc9Q8R1J3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zcchc9Q8R1J3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.91■■□□□ 1.42
Zcchc9Q8R1J3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.91■■□□□ 1.42
Zcchc9Q8R1J3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Zcchc9Q8R1J3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Zcchc9Q8R1J3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Zcchc9Q8R1J3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Zcchc9Q8R1J3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Zcchc9Q8R1J3 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.88■■□□□ 1.41
Zcchc9Q8R1J3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Zcchc9Q8R1J3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Zcchc9Q8R1J3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Zcchc9Q8R1J3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Zcchc9Q8R1J3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
Zcchc9Q8R1J3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Zcchc9Q8R1J3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Zcchc9Q8R1J3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Zcchc9Q8R1J3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Zcchc9Q8R1J3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms