Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YDR455CYDR455C 309 nt13.92□□□□□ -0.18
RKR1Q04781 SPP2YOR148C 558 nt13.92□□□□□ -0.18
RKR1Q04781 YAL016C-AYAL016C-A 315 nt13.92□□□□□ -0.18
RKR1Q04781 ADH3YMR083W 1128 nt13.92□□□□□ -0.18
RKR1Q04781 YOR268CYOR268C 399 nt13.92□□□□□ -0.18
RKR1Q04781 TAT2YOL020W 1779 nt13.91□□□□□ -0.18
RKR1Q04781 PHB2YGR231C 933 nt13.91□□□□□ -0.18
RKR1Q04781 YMR007WYMR007W 381 nt13.91□□□□□ -0.18
RKR1Q04781 FMS1YMR020W 1527 nt13.9□□□□□ -0.18
RKR1Q04781 TGA1tA(UGC)A 73 nt13.89□□□□□ -0.19
RKR1Q04781 tA(UGC)EtA(UGC)E 73 nt13.89□□□□□ -0.19
RKR1Q04781 tA(UGC)GtA(UGC)G 73 nt13.89□□□□□ -0.19
RKR1Q04781 tA(UGC)LtA(UGC)L 73 nt13.89□□□□□ -0.19
RKR1Q04781 tA(UGC)OtA(UGC)O 73 nt13.89□□□□□ -0.19
RKR1Q04781 PAC11YDR488C 1602 nt13.89□□□□□ -0.19
RKR1Q04781 THP3YPR045C 1413 nt13.88□□□□□ -0.19
RKR1Q04781 YMR206WYMR206W 942 nt13.88□□□□□ -0.19
RKR1Q04781 GRH1YDR517W 1119 nt13.86□□□□□ -0.19
RKR1Q04781 YJL067WYJL067W 351 nt13.86□□□□□ -0.19
RKR1Q04781 BOR1YNL275W 1731 nt13.86□□□□□ -0.19
RKR1Q04781 FCY1YPR062W 477 nt13.83□□□□□ -0.2
RKR1Q04781 ERG13YML126C 1476 nt13.81□□□□□ -0.2
RKR1Q04781 PCP1YGR101W 1041 nt13.81□□□□□ -0.2
RKR1Q04781 KAE1YKR038C 1161 nt13.8□□□□□ -0.2
RKR1Q04781 ZRT3YKL175W 1512 nt13.8□□□□□ -0.2
RKR1Q04781 MOB1YIL106W 945 nt13.79□□□□□ -0.2
RKR1Q04781 RCR1YBR005W 642 nt13.79□□□□□ -0.2
RKR1Q04781 SER2YGR208W 930 nt13.76□□□□□ -0.21
RKR1Q04781 CWC15YDR163W 528 nt13.75□□□□□ -0.21
RKR1Q04781 HRA1HRA1 564 nt13.74□□□□□ -0.21
RKR1Q04781 ENO2YHR174W 1314 nt13.73□□□□□ -0.21
RKR1Q04781 OPI3YJR073C 621 nt13.69□□□□□ -0.22
RKR1Q04781 ACH1YBL015W 1581 nt13.68□□□□□ -0.22
RKR1Q04781 HTS1YPR033C 1641 nt13.68□□□□□ -0.22
RKR1Q04781 ASP3-1YLR155C 1089 nt13.67□□□□□ -0.22
RKR1Q04781 ASP3-2YLR157C 1089 nt13.67□□□□□ -0.22
RKR1Q04781 ASP3-3YLR158C 1089 nt13.67□□□□□ -0.22
RKR1Q04781 ASP3-4YLR160C 1089 nt13.67□□□□□ -0.22
RKR1Q04781 BET2YPR176C 978 nt13.67□□□□□ -0.22
RKR1Q04781 EDC2YER035W 438 nt13.66□□□□□ -0.22
RKR1Q04781 RRT8YOL048C 1029 nt13.64□□□□□ -0.23
RKR1Q04781 TVP23YDR084C 600 nt13.63□□□□□ -0.23
RKR1Q04781 AIM1YAL046C 357 nt13.62□□□□□ -0.23
RKR1Q04781 FSH2YMR222C 672 nt13.62□□□□□ -0.23
RKR1Q04781 SDH8YBR269C 417 nt13.62□□□□□ -0.23
RKR1Q04781 DIG1YPL049C 1359 nt13.61□□□□□ -0.23
RKR1Q04781 TPC1YGR096W 945 nt13.61□□□□□ -0.23
RKR1Q04781 YNR064CYNR064C 873 nt13.59□□□□□ -0.23
RKR1Q04781 YPL247CYPL247C 1572 nt13.59□□□□□ -0.23
RKR1Q04781 tL(UAA)B1tL(UAA)B1 84 nt13.58□□□□□ -0.24
RKR1Q04781 tL(UAA)B2tL(UAA)B2 84 nt13.58□□□□□ -0.24
RKR1Q04781 tL(UAA)DtL(UAA)D 84 nt13.58□□□□□ -0.24
RKR1Q04781 SUP51tL(UAA)J 84 nt13.58□□□□□ -0.24
RKR1Q04781 tL(UAA)KtL(UAA)K 84 nt13.58□□□□□ -0.24
RKR1Q04781 tL(UAA)LtL(UAA)L 84 nt13.58□□□□□ -0.24
RKR1Q04781 tL(UAA)NtL(UAA)N 84 nt13.58□□□□□ -0.24
RKR1Q04781 SRP102YKL154W 735 nt13.58□□□□□ -0.24
RKR1Q04781 CYC3YAL039C 810 nt13.57□□□□□ -0.24
RKR1Q04781 ERO1YML130C 1692 nt13.56□□□□□ -0.24
RKR1Q04781 YKR012CYKR012C 378 nt13.55□□□□□ -0.24
RKR1Q04781 NAM8YHR086W 1572 nt13.55□□□□□ -0.24
RKR1Q04781 SDS24YBR214W 1584 nt13.55□□□□□ -0.24
RKR1Q04781 BAP3YDR046C 1815 nt13.55□□□□□ -0.24
RKR1Q04781 PRE5YMR314W 705 nt13.54□□□□□ -0.24
RKR1Q04781 EMC3YKL207W 762 nt13.53□□□□□ -0.24
RKR1Q04781 AMF1YOR378W 1548 nt13.52□□□□□ -0.25
RKR1Q04781 SAC7YDR389W 1965 nt13.5□□□□□ -0.25
RKR1Q04781 ELO1YJL196C 933 nt13.49□□□□□ -0.25
RKR1Q04781 REX2YLR059C 810 nt13.49□□□□□ -0.25
RKR1Q04781 YGR210CYGR210C 1236 nt13.49□□□□□ -0.25
RKR1Q04781 VPS62YGR141W 1404 nt13.48□□□□□ -0.25
RKR1Q04781 YJL160CYJL160C 864 nt13.47□□□□□ -0.25
RKR1Q04781 PET18YCR020C 648 nt13.46□□□□□ -0.25
RKR1Q04781 YLR280CYLR280C 351 nt13.45□□□□□ -0.26
RKR1Q04781 ENO1YGR254W 1314 nt13.43□□□□□ -0.26
RKR1Q04781 YMR210WYMR210W 1350 nt13.41□□□□□ -0.26
RKR1Q04781 LEU2YCL018W 1095 nt13.41□□□□□ -0.26
RKR1Q04781 YDL086WYDL086W 822 nt13.37□□□□□ -0.27
RKR1Q04781 YPL108WYPL108W 507 nt13.37□□□□□ -0.27
RKR1Q04781 PBP1YGR178C 2169 nt13.36□□□□□ -0.27
RKR1Q04781 UTR5YEL035C 501 nt13.36□□□□□ -0.27
RKR1Q04781 VBA3YCL069W 1377 nt13.35□□□□□ -0.27
RKR1Q04781 SWT21YNL187W 1074 nt13.35□□□□□ -0.27
RKR1Q04781 LSB6YJL100W 1824 nt13.35□□□□□ -0.27
RKR1Q04781 ELP4YPL101W 1371 nt13.35□□□□□ -0.27
RKR1Q04781 MRP1YDR347W 966 nt13.32□□□□□ -0.28
RKR1Q04781 YAT1YAR035W 2064 nt13.32□□□□□ -0.28
RKR1Q04781 YLR046CYLR046C 813 nt13.29□□□□□ -0.28
RKR1Q04781 SFL1YOR140W 2301 nt13.28□□□□□ -0.28
RKR1Q04781 CCT2YIL142W 1584 nt13.28□□□□□ -0.28
RKR1Q04781 YIL100C-AYIL100C-A 339 nt13.27□□□□□ -0.29
RKR1Q04781 NAR1YNL240C 1476 nt13.26□□□□□ -0.29
RKR1Q04781 ADA2YDR448W 1305 nt13.24□□□□□ -0.29
RKR1Q04781 OPI10YOL032W 741 nt13.24□□□□□ -0.29
RKR1Q04781 YOR325WYOR325W 474 nt13.24□□□□□ -0.29
RKR1Q04781 ALG12YNR030W 1656 nt13.22□□□□□ -0.29
RKR1Q04781 YKL053WYKL053W 375 nt13.22□□□□□ -0.29
RKR1Q04781 CYT2YKL087C 675 nt13.22□□□□□ -0.29
RKR1Q04781 MET1YKR069W 1782 nt13.22□□□□□ -0.29
RKR1Q04781 LSP1YPL004C 1026 nt13.2□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 83.3 ms